Galeopterus variegatus (Sunda flying lemur): 103594842
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Entry
103594842 CDS
T08727
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gvr03009
]
103594842 (PDCD11)
Ribosome biogenesis [BR:
gvr03009
]
Eukaryotic type
90S particles
Other 90S particles
103594842 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
OB_RRP5
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
OB_RRP5_4th
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
ARM_TT21
TPR_12
DUF2110
TPR_CcmH_CycH
UTP6_C
ARM_TT21_5th
DUF7017
TPR_15
Motif
Other DBs
NCBI-GeneID:
103594842
NCBI-ProteinID:
XP_008576343
LinkDB
All DBs
Position
Unknown
AA seq
1876 aa
AA seq
DB search
MAALEESFPRGGTRKPHKSDKAFQQSVEQDNLFDISTEEESTKRKKSQKGPAKTKKLKIE
KRESIKSVREKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEISDAYT
KMLNEQVTQEEPLKDLLCLPELFSPGMLVRCVVSSVSITERGKKSVKLSLNPQNVNRVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVGGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLN
CIIEEVKGNGGVVSLSIGHSEVSAAIATEDQNWTLNNLLPGLVVKAQVQKVTPFGLMLNF
LTFFKGLVDFMHQDPKKAGTYFSNQAVRACILCVHPRTKVVRLSLRPIFLQPGRPLSRLS
CQHVGAVLDDIPVQGFFNKAGATFRLKDGALAYARLSHLSDSKNIFNPESFKPGNTHKCR
IIDYSQMDGLALLSLRTSIIEAQYLRYHDIKPGAVVKGTVLTIKPYGMLVKVGEQMRGLV
PPMHLADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLVESKLPAITCYADGK
SGLQTHGFIIRVKDYGCIVKFYNDVQGLVPKHELSAQYIPDPERVFYIGQVVKVVVLNSE
PSKERMLLSFKLLNHPESKKEHAGHSQKKRGGVNVGQLVDVKILEKTKDGLEVAILPYNI
PAFLPTPHLSDHVANGPLLHHWLQAGDTLHRVLCLSQSEGHILLCRKPALVSTVEGGQDP
KNFSEIHPGMILIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFIEGQTVV
AKVTSVDEEKQRMLLSLRLSDCALGDLATTSLLLLSQCLEELQGVRSLMSNRDSVLHQTL
AEMTPGMFLDLAVQEVLENGSVVFSGGPVPGLVLRASRYHRAGQKVEAGQKKKVVILHVD
MLKLEVHVSLRQNLVNRKAKTLKKGSEHQAIVQHLEESFAVASLVETGHLVAFSLTSHLN
DTFRFDSEKLHVGQGVSLTLKTTEPGMTGLLLAVEGPAAKRTMRQTRKDSETVDEDEEVD
PALAVGTVKKHTLSIGDIVTGTIKSVKPTHVVVTLEDGIIGCIHASHILDDVPVGTSPTT
KLKVGKTVTARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELEKDGYTALNTHSVSP
MEKIKQYQAGQTVTCFLKRYNVVKKWLEVEIAPDVRGRIPLLLTSLSFKVLKHPDKKFQI
GQALRATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPNEGLTVSFPFGKMGRVS
VFHVSDSYSERPLEDFVPQKVVRCYVLSTADHVLTLSLRASRTNPETKSRIEDPEVNSIQ
DIKEGQLLRGYVRSIELDGVLFGLGSSVVGLAQYPHVSQYSPSKKALYNKYLPEGKLLTA
KVLSLDQQKNLVELSFLPSDTGKPDVFPASLELPLVKPEEGKIETKKRDQKGKEEKKKSQ
KRKEQKNQKGQEEGKLRSQEREAPQQPQMKRQGKRERRESGSEQDRGNKKPKKAGSSEED
DRRVEVYYREGEEEVEETSVPPKEKQTKPAEAPRLQLSSGFVWNVGLESLTPALPPRGES
SDSEEDEKPHQAMQKKKSKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSS
PNSSILWLQYMVFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQE
SLTKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFL
LRRGQAGASHRLLQRALECLPKKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSIYPKRT
DVWSVYIDMTIKHGSQKDVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVK
AKALEYVEARSSVLED
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctggaagaaagcttcccccgagggggtacaagaaagccccacaaatcagac
aaagctttccagcagtcagttgaacaagacaacttatttgatatttctactgaagaagaa
tccaccaaaaggaagaagagccagaaagggccagcaaaaacaaaaaagttgaaaatcgaa
aagagagaaagcatcaagtctgtaagagagaaatttgaaatcctgagtgttgagtcccta
tgtgagggaatgcggattttgggttgtgtgaaagaggtaaacgaactggaactggtgatc
agtctccccaatggcctccaggggtttgtgcaagtgactgaaatctctgatgcctatacc
aaaatgctgaacgaacaggtgacccaagaagaacctctgaaggacctactctgcttgcct
gaacttttctcacctggaatgctggtgagatgtgtggtgagcagtgtgagcatcacagag
aggggcaaaaagagtgtcaagctatctctgaacccccaaaatgtcaacagagtgctgagt
gctgaggccctgaagcctggcatgctgctcacaggcactgtgtctagcctggaagaccat
ggctacctagtagacattggtgttggtggtaccagagcttttctgccactgctgaaagcc
caggagtacatccgacagaagaacaaaggtgccaaactgaaggtgggtcaatacctgaac
tgcatcattgaagaggtgaagggcaatggaggagttgtcagtctgtctataggtcattca
gaggtttctgcagccattgctactgaggaccaaaactggacacttaataacttgctacca
ggactggtggtcaaagcccaggtacagaaggtgactccatttggccttatgctaaacttc
cttacattcttcaaaggcctggttgactttatgcaccaggatcctaagaaggctggaaca
tatttctcaaaccaagcagtaagggcctgcatcctctgtgtccatcctcggaccaaagtt
gtgcgcttgagcctgcgccccatctttctgcaacctgggcgcccgctcagtcggctctct
tgccagcatgttggagctgtgctggatgacattcctgtccaaggctttttcaataaggcc
ggggccaccttcaggctgaaggatggggctctggcctatgcccggctcagccatctctct
gactctaagaacatcttcaatcctgagtccttcaagccagggaatacccacaagtgtaga
attattgactacagccaaatggatggactggctttgctctctctgcggacgtctattatt
gaagctcagtacctaagatatcatgacatcaaacctggggcagtggtaaagggcacagtg
ctgaccataaagccatatggaatgctggtgaaggtgggcgagcaaatgaggggcctagta
cctcccatgcacctggctgacatcctgatgaagaatccggagaagaagtaccacattggg
gatgaggttaagtgccgggttttgctttgcgatcctgaagccaagaagctgatgatgacc
ttgaagaaaaccctggttgagtccaaattacctgccatcacctgctatgccgatggcaag
tctggtctgcagacacatggcttcatcatcagggtcaaggattatggctgcattgtgaag
ttctacaatgatgtgcagggactggtgcccaagcatgagctcagtgcccagtatatccct
gacccagagagggtcttttatattggccaggtggtgaaggttgtagtgctgaactctgag
ccgtccaaggagaggatgctcttatccttcaagctgttgaatcatccagaatcaaagaaa
gagcatgccggacacagtcagaagaaaagaggaggtgttaatgttggacagttggtggat
gtgaagattttagagaagaccaaagatgggctggaggtggccatcctgccctacaatatc
cctgctttcctccccacgcctcatctatcggaccacgttgccaatggcccactgttacat
cactggctccaagcaggtgacaccctccaccgagtcctctgtctgagccagagtgaagga
catattcttctttgcaggaagccagctttagtctccacagtagaaggtggccaagatccc
aagaacttctcagaaatccatcctggaatgatactcattggtttcgtgaagagcatcaag
gactatggtgtgttcatccagttcccctcgggtcttagtggactggcccccaaagctatc
atgagtgacaaattcgtgacctccacaagtgaccacttcattgaggggcagacagtggtt
gcgaaggtgaccagtgtggatgaggagaagcagcggatgctgctgtcactgcggctttcg
gactgtgctctgggggacttggccaccaccagcctcctcctcctgagccagtgcctggag
gagctgcagggtgtgcgcagcctcatgagcaaccgagactctgtgttgcaccagacgctg
gctgagatgaccccaggaatgttccttgacctggcagtgcaggaggtgttggaaaatggt
tctgtggtgttcagtgggggcccagtgcctggcctggtcctgagagccagcagatatcat
cgggcagggcagaaggtggaagctgggcagaaaaagaaggtcgtaatcttacatgttgat
atgttgaagttggaagtgcatgtttctcttcgccagaacttggtgaatagaaaagctaaa
acgttgaagaaaggcagtgaacaccaggcgattgtgcagcacttggaagagtcctttgct
gttgcctccttggtagagaccggccacctggtagctttctctctgacctctcatcttaat
gacacctttcgctttgactcggagaagttacacgtgggacagggtgtctccctaaccctc
aagaccacagaacctggaatgactggtcttcttttggctgttgaggggccagctgctaag
aggaccatgagacagactcggaaggactctgagacagttgatgaggatgaggaagtggat
ccagctctggctgtagggactgtaaagaagcacaccctgtccatcggggacatagtcacc
gggactatcaagtccgttaagcccacccatgtggttgtgaccttggaagatggcatcatt
ggctgtatccatgcctcccacattctagatgatgttccagtgggcacctctcctacgacc
aagctgaaagttgggaagacagtcactgcccgagtgattggcgggcgagacatgaagaca
ttcaagtttctcccaataagtcaccccagatttattcgaaccatcccggagctgagcgtt
cggccaagtgaattggagaaggatggctacactgctcttaacactcactctgttagcccc
atggagaagatcaaacagtaccaggctggtcagactgtgacttgcttcttaaagaggtac
aatgtggttaagaaatggcttgaggtggagattgcaccggatgtccgagggagaattccc
ttgttgctcacttctctcagcttcaaggttctgaagcatccagataagaagttccagatt
ggccaggccctgagggccactgtggtggggccagattcctccaaggccttcttatgtctc
tcactcataggtcctcacaagcttgagaaaggggaagtggccatgggccgggtggtgaag
gtgactcccaatgaagggctgactgtctccttcccctttgggaagatgggaagagtcagt
gtatttcatgtgagtgactcctactctgagaggcccctggaggactttgtcccccagaag
gttgtccgatgttatgtcctgtccactgcagaccatgtattgaccctgtcgctgcgagcg
tccagaacaaacccagagacgaaaagcagaatagaagatccggaggttaactccatccag
gacataaaggaagggcagctcctgcggggctacgtgaggtccatcgagctggatggtgtg
ttgtttggccttggctcctcggttgtgggtttggcccagtacccacatgtctcccagtac
agcccatccaagaaagccctttataacaaatacctccctgaagggaagctgctcacagcc
aaggtcctaagcctggaccagcagaagaacctggtagagctgtcgttcctccccagtgac
actgggaagccggatgtatttcctgcctccctggaactgccacttgtaaagccggaagag
gggaaaatagagaccaagaagagagaccaaaaaggaaaagaggagaagaagaagagtcag
aaaaggaaagagcagaagaaccagaaggggcaggaggaggggaagctgcgcagccaggag
agagaagctccccagcagccacagatgaagaggcagggcaagcgggagcgccgggagtcg
ggaagtgaacaggacagagggaacaagaagccaaagaaagctggctcgtcagaggaggac
gacagaagggtggaagtgtactatcgggaaggagaggaggaggtagaggagacgagtgtg
ccgcccaaggagaagcagaccaagccagcagaagcaccacggctgcagctgtcctcaggc
tttgtttggaacgtggggctagaatctctgaccccggccttgccacctcgaggagagagc
tcagacagcgaggaggacgagaaaccacaccaggccatgcagaaaaagaagagcaagaag
gaaagggagttggagaaacagaaggcagaaaaagagctgtcccgcatcgaggaggcgctg
atggaccctgggcgacagccagagtcagcagatgactttgaccgactcgtgctaagctcc
cccaacagctccatcctgtggctgcaatacatggttttccacctgcaggccacggagatc
gagaaggcccgggccgtggccgagagggccctgaaaaccatctccttcagagaggagcag
gagaagctgaacgtgtgggtggcactgctgaacctagaaaacatgtatggctctcaggag
tccctgaccaaggtctttgagcgggccgtgcagtacaatgagcctctcaaggtctttctc
catctggctgacatctacaccaagtcagagaaattccaggaagctggtgaactctacaac
cggatgctgaagcgtttccgccaggagaaagctgtctggatcaaatatggcgcctttctc
ctgcggaggggccaggctggggccagtcaccgcctgctgcagcgtgccctcgagtgcctg
cctaaaaaggagcatgtggatgtgattgccaagtttgcccagcttgagttccagctggga
gatgcagagcgggccaaagccatttttgaaaacacgctgagcatctacccaaagcgcaca
gatgtctggtcagtctacattgacatgaccatcaagcatggcagccagaaggatgtcagg
gacatctttgagcgtgtcattcatctgagcctggcccccaagagaatgaagttcttcttc
aagcgctacctagactatgagaagcaacatggcactgagaaggacgtgcaggcagtcaag
gcaaaggccctggaatacgtggaggccaggagctcagtgctggaggactag
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integrated database retrieval system
