Galeopterus variegatus (Sunda flying lemur): 103595241
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Entry
103595241 CDS
T08727
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03015
mRNA surveillance pathway
gvr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103595241 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103595241 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gvr03021
]
103595241 (SYMPK)
03019 Messenger RNA biogenesis [BR:
gvr03019
]
103595241 (SYMPK)
Transcription machinery [BR:
gvr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103595241 (SYMPK)
Messenger RNA biogenesis [BR:
gvr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103595241 (SYMPK)
U7-dependent histone pre-mRNA processing factors
103595241 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
103595241
NCBI-ProteinID:
XP_008576810
UniProt:
A0ABM0R870
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MASSSGDSITRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLNVLKHPASVEFQAQITTLLVDLGTPQAEIARNMPSSKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKTSAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRVKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAASTSGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQETEAKEAPAGPLEEDDLEPLALAPAPTPAPAPAPRP
PQDLIGLRLAQEKALKRQLEEEQKLKPGGAGAPSFSSSSAASSSARPGPPPSEETIDFRE
EGPECETPAIFISVDDDSGLTEAALLDSSLEGPLPKEVAGGLTSKEERSPQTVAPAGEDV
VKTPSPDAEEAGESETKGNS
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagcagtggggacagcatcacccgccggagtgtggcatctcagtttttcaca
caagaggaggggccaggcatcgatggcatgaccacctcagagagggtggtggatctcctg
aaccaggcagcgctgatcaccaatgattcaaagatcacagtgctcaaacaggtccaggag
ctgatcatcaacaaagaccccacactactagacaacttcttggatgagatcattgctttc
caagcagacaagtcgattgaagtgcgaaagtttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttactgctgaagctaattgcaaacctcaacatgctcttgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtcatcagcgagctccaggaagcctgctgggacatg
gtgtctgccatggctggagatatcatcctgctgttggattctgacaacgatggcatccgc
acccacgccatcaagttcgtggagggccttattgtcaccctgtcacctcgcatggctgac
tcggagataccccgacgccaggagcatgacatcagcttggaccgcattcctcgcgaccac
ccctatatccagtacaatgtgctatgggaagagggcaaggcggcattggagcagctgctt
aagttcatggtgcaccccgccatctcctccatcaacctgaccacagcgctgggctccctc
gccaatattgcccgccagagacccatgtttatgtctgaggtgatccaggcctatgaaacc
ctgcatgccaatctgcccccgacactggccaaatctcaggtgagcagtgtgcgtaagaac
ctcaaattgcacctgttgaatgtgctgaagcacccagcctccgtggagttccaggcccag
atcaccaccctgctggtggacctgggcacacctcaggctgagatcgcccgcaatatgccc
agcagcaaggatgctcgcaagcggccccgagatgactcagattccacactcaagaagatg
aagctagagcccaacctgggggaagatgatgaggataaagacttggagccaggcccgtca
gggacatcaaagacctcagcccagatctcaggccagtcagacacagacatcacagctgag
ttcctacagcctctactgacaccggacaatgtggccaatctggtccttattagcatggtg
tacctgcctgaggccatgcctgcctcctttcaagccatctatacccccgtggagtcagca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacacagatgacggccgct
ggactggggccaggtgtggagcagaccaagcagtgcaaggaggagcccaaggaggagaag
gtggtgaagccagagagtgtcttgatcaagcggcgcctgtcagcacagggccaagccatc
tcggtggtgggctccctgagttccatgtcccctctggaggaagaggcaccccaggctaag
agaaggccagagcccatcatccctgtcacgcaaccccggctggcaggtgctggcgggcgc
aagaaaatcttccgtctgagtgacgtgctgaagcccctgactgacgcccaggttgaggcc
atgaagctgggcgctgtgaagcggattctgcgtgctgagaaggccgtggcctgtagtggg
gcagcccaggtgcgtgtaaagatcctggccagcctggtgacacagtttgactcgggcctg
aaggccgaggtcctgtctttcatcctggaggatgtgcgggcccgcctggacctggccttt
gcctggctctaccaggagtataacgcctacctggcagccagtacctcgggcacactggat
aagtatgaggactgcctcatccgcctgctctctggcttgcaggagaaaccagaccagaag
gatgggatcttcaccaaggttgtgttggaggcaccgctcatcaccgagagtgccctggag
gtgattcgcaagtactgtgaggatgagagtcgcacctacctgggcatgtccacgcttcgt
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctcctagatctc
agctcccatgagaaggacaaggtgcgttcccaggccctgctgttcatcaaacgcatgtat
gagaaggaacagctgcgcgagtatgtggagaaatttgctctcaactacctgcagcttttg
gttcaccccaacccaccatctgtgctgtttggagctgacaaggatacagaagtggcagcg
ccctggactgaggagacggtgaagcagtgtctgtacctctatctggccctcctgcctcag
aaccacaagctgatccatgagctggcagctgtgtatactgaagccatcgctgacatcaaa
cggacggtgctgagggtcatcgagcagccgatccgaggaatgggcatgaactctccggag
ctactcctgctggtggaaaactgtcccaagggggcagagacattggtcacccgatgtctg
cacagcctcacagacaaagtcccaccctccccagagctggtgaagcgggtccgtgatctc
taccacaagcgcctgccagatgtccgcttcctcatcccagtgctcaatgggctggagaag
aaagaggtgatccaggcccttcctaaactcatcaaactcaaccccatcgtggtgaaggag
gtcttcaatcgcctgctaggcacccagcatggcgaagggaactcagccttgtccccactg
aaccccggagagctcctgatcgcattacacaacatcgactcggtaaaatgcgacatgaag
tccatcatcaaagccaccaacttgtgctttgcggagcggaacgtgtacacatcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgccaacgcaccaagccccagagcttccaggtcatcctgcagctgccgccccagcag
ctgggagctgtctttgacaagtgccctgagctccgggagcccctgctggcccacgtccgc
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcttggaggcc
agcggcaaacaggagacagaggccaaggaggcacctgcagggcccctggaagaggacgac
ctggagcccttggccctggctccggctccgaccccggccccggccccggccccccggccc
ccgcaagacctcatcggcctgcggctggcccaggagaaggccttaaagcggcagctggag
gaggaacagaagctgaagcctgggggagcaggagccccctccttttcctcctcgtccgcc
gcctcttcctcggcgcgcccgggccctcccccgtcggaggaaaccatagatttccgggag
gaggggcctgagtgcgagaccccggccatcttcatcagcgtggatgacgactcggggctg
accgaggccgcgctcctggactctagtcttgaggggcccctacctaaggaggtagcgggc
gggttgacttccaaggaggagcggagcccccagacagttgcccctgccggagaagacgtc
gtgaagacccccagcccggacgccgaggaagcgggagaatccgagactaaggggaacagt
taa
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