Galeopterus variegatus (Sunda flying lemur): 103595449
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Entry
103595449 CDS
T08727
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr04151
PI3K-Akt signaling pathway
gvr04510
Focal adhesion
gvr04512
ECM-receptor interaction
gvr04518
Integrin signaling
gvr04974
Protein digestion and absorption
gvr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103595449 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103595449 (COL2A1)
04518 Integrin signaling
103595449 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103595449 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103595449 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103595449 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gvr00536
]
103595449 (COL2A1)
Glycosaminoglycan binding proteins [BR:
gvr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103595449 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
103595449
NCBI-ProteinID:
XP_008577076
UniProt:
A0ABM0R8Y5
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDVKDCLSPEIPFGECCPICPTDLTTASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGADGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGGRGEPGGVGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPAGRAGDPGLQGPAGPPGEKGEPG
DDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSSGPAG
PTGKQGDRGETGAQGPMGPAGPAGARGIPGPQGPRGDKGESGEPGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADEAAGNLRQHDVEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDSLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTALKDGCTK
HTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGADIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccaggaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtttgtgacactggg
actgtcctctgcgacgacataatctgtgaagatgtgaaagactgcctcagccccgagatc
cccttcggagagtgctgccccatctgcccaactgacctcaccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatatcgtaggacctaaagga
cctcctgggcctcagggacctgcaggcgaacaaggacccagaggtgatcgtggtgacaaa
ggtgaaaagggtgcccctggacctcgtggcagagatggagaacctgggacccctgggaat
cctggcccccctggtcctcctggccccccaggtccccctggccttggtggaaactttgct
gcccagatggcaggaggatttgatgagaaggctggtggcgcccagttgggagtaatgcaa
gggccaatgggccccatgggacctcgaggacctccgggccctgccggtgctcctggaccc
caaggatttcaaggcaatcctggtgaacctggtgaacctggtgtctctggtcctatgggt
ccccgtggtcctcctgggccccctggaaaacctggtgatgatggtgaagctggaaaacct
ggaaaagctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccgggaacc
ccaggccttcctggtgtcaaaggtcacagaggctacccaggactggacggtgctaaggga
gaagctggtgccccaggtgtgaagggtgagagtggttcccccggtgagaatggttctcct
ggcccaatgggtccccgcggcctgcctggtgagagaggacggactggccctgctggtgct
gcaggtgcccggggcaacgacggtcagccaggacccgcagggcctccgggtcccgtcggt
cccgctggtggtcctggcttccctggtgctcctggtgccaagggtgaagctggccccact
ggtgcccgtggtcctgaaggcgctcaaggtcctcgcggtgaacctggtactcctgggtcc
cctgggcctgctggggcctctggtaaccccggagctgatggaattcctggagccaaagga
tctgctggcgctcctgggattgctggtgctcctggcttccctgggccccgtggtcctccc
ggccctcaaggtgcaaccggtcctctgggcccaaaaggtcagacgggtgaacctggtatt
gctggcttcaaaggtgaacaaggccccaagggagaacctggccctgctggtccccaggga
gcccctggtcctgctggtgaagaaggcaaaagaggtggccgtggagagcctggcggtgtg
gggcctgttggtccgcctggggaaagaggtgctcctggaaaccgtggtttcccaggtcag
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggccttgctggt
cccaagggagccaatggtgaccctggccgtcctggagaacctggccttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggcccttctggggcc
cctggtgaagatggtcgccctggacctccaggtcctcagggtgctcgtggccagcctggt
gtcatgggtttccctggtcctaaaggtgccaatggcgagcctggcaaagctggtgagaag
ggactgcctggcgctcctgggctgagaggtcttcctggcaaagatggtgaaacaggagct
gcgggaccccctggccccgctggacctgctggtgaacgaggcgagcaaggtgctcctggg
ccatctggcttccagggacttcctggccctcctggtcccccaggtgaaggtggaaaacct
ggtgaccagggtgttcccggtgaagctggagcccccggcctcgtgggtcccaggggtgaa
cgaggtttcccaggtgaacgtggctctcctggtgcccagggcctccagggtgccaggggc
ctgcctggcactcctggcactgatggtcccaaaggtgcatctggcccagctggcccccct
ggggctcagggccctccaggtcttcagggaatgcctggtgagaggggagcagccggtatc
gctgggcccaagggagacagaggtgatgttggtgagaagggccccgagggagcccccgga
aaggatggtggaagaggcctgactggtcccattggtccccctggcccagctggtgccaac
ggtgagaagggagaagtcggacctcctggtcccgcgggaagtgctggtgctcgtggtgcc
ccgggtgaacgtggagagactgggccccccggacctgctggatttgctggacctcccggt
gctgatggccagccaggcgccaagggtgagcaaggagaggccggccagaaaggcgatgct
ggtgcccctgggcctcagggcccctctggagctcctgggcctcagggtcctactggagtg
actggtcctaaaggagcacgaggtgcccaaggccccccgggagccactggattccctgga
gctgctggccgcgttggacccccaggctccaatggcaacccgggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggccccgctggccga
gctggtgaccctggcctccaaggtcctgctggaccccctggcgagaagggagagcccggg
gatgatggtccctctggtgccgacggtcctccaggtccccagggtctggctggccagagg
ggcatcgttggtctgcctgggcagcgtggtgagagaggattccccggcttgcctggccca
tcgggtgagcctggcaagcagggagctcctggtgcatctggagatcgaggtcctcctggc
cctgtgggtcctcctggcctgactggtcctgcgggtgaacctggacgtgagggaagccct
ggtgctgatggaccccctggcagagatggcgcggctggagtcaagggtgatcgtggtgag
actggcgctgtgggtgctcccggggcccctgggccccctggctcttctggccccgccggc
ccaactggcaagcagggagacagaggagaaactggtgcacaaggccccatgggacctgca
ggaccagctggagcccggggaatcccaggccctcaaggcccccgaggtgacaaaggagaa
tctggagagcctggcgagaggggactgaagggacaccgtggcttcactggtctgcagggt
ctgcccggacctcctggtccttctggagaccaaggcgcttctggtcctgctggcccttct
ggccctagaggtcctcctggccccgttggtccctctggcaaagatggcgctaatggaatc
cctggccccattggtcctcctggtccccgtggacgctcaggcgaaactggtcctgctggt
cctcctggaaatcctggacccccgggccctccaggtccccctggccctggcatcgacatg
tctgcttttgctggcctaggccagagagagaagggtcctgaccccctgcagtacatgcgg
gctgacgaggcagctggtaacttgaggcagcatgacgtcgaggtggatgccacccttaag
tccctcaataaccagatcgaaagcatccgcagtcctgagggctcccgcaagaaccctgct
cgcacctgccgggacctgaaactctgccaccccgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggatgccatgaaggttttctgcaacatggagactggc
gagacctgtgtctaccccaaccctgcaaatgtgcccaagaagaactggtggagcagcaag
agcaaggagaagaaacacatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggagatgacagcctggctcccaacactgccaacgtgcagatgaccttcctacgcctg
ctgtccacggaaggctcccagaatatcacctaccactgcaagaacagcattgcctacctg
gacgaagcagctggcaacctcaagaaggccctgctcatccagggctccaacgacgtggag
atccgggctgagggcaacagcaggttcacgtatactgccctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactgtcattgagtaccggtcacagaagacctcacgtctc
cccatcattgacattgcacccatggacataggagggcctgagcaggaatttggtgcggac
atagggcctgtctgcttcttgtaa
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integrated database retrieval system
