Galeopterus variegatus (Sunda flying lemur): 103596857
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Entry
103596857 CDS
T08727
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1 isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103596857 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gvr03019
]
103596857 (XAB2)
03041 Spliceosome [BR:
gvr03041
]
103596857 (XAB2)
Messenger RNA biogenesis [BR:
gvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103596857 (XAB2)
Spliceosome [BR:
gvr03041
]
Complex B
Other components
Prp19-related factors
103596857 (XAB2)
Complex C
103596857 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
TPR_MalT
ARM_TT21_C
TPR_1
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
103596857
NCBI-ProteinID:
XP_008578821
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVSDPAYEDVINCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRLHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRSIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQNKILFVRSDTSREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactgtcgcggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaagaaatcatgcggaaccagttctctgtcaaatgctggctccgt
tacatcgagttcaaacagggtgccccaaagcccaggctcaatcagctgtatgagcgggcc
ctcaagctactgccttgcagctacaaactctggtaccgctacctgaaggcacgccgggca
caggtgaagcaccgttgtgtgtccgaccctgcctatgaagatgtcatcaactgccatgag
agggcctttgtgtttatgcacaagatgccccgactgtggctagattattgccaattcctg
atggaccaggggcgtgtcacacacacccgtcgcaccttcgaccgtgccctccgggcactg
cccatcacgcagcactctcgtatttggcccctatacctacgcttcctgcgcttgcacccg
ctacctgagacagctgtgcgaggctatcggcgcttcctcaagctgagtcctgagagtgca
gaggagtacattgagtacctcaagtcaagtgaccggctggatgaggcagcacagcgtctg
gccactgtggtcaacgacgagcgcttcgtgtccaaggctggcaagtccaactaccagctg
tggcatgagctgtgcgacctcatctcccagaacccagacaaggtgcagtccctcaacgtg
gacgccatcatccgcgggggcctcacccgcttcactgaccagctgggcaagctctggtgc
tcgctggctgactactacatccgcagcggccactttgagaaggctcgggacgtgtatgag
gaggccatacggaccgtgatgaccgtgcgggacttcacacaggtgtttgacagctacgcc
cagttcgaggagagcatgattgcagctaagatggagaccgcctcggagctggggcgggag
gaggaggatgatgtggacctggagctgcgcctggcccgctttgagcagctcatcagccgg
cgacccctgctcctcaacagtgtcttgctgcgccagaacccccaccatgtgcatgagtgg
cacaagcgtgtagccctgcaccagggccgcccccgggagatcattaacacgtacacggag
gctgtgcagacagtggaccccttcaaagctacaggcaagccccacacactgtgggtggcg
tttgccaagttttatgaggacaacgggcagctggacgatgcccgcgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggacgacctggccagtgtgtggtgtcagtgcggg
gagctggagctccgtcacgaaaactacgatgaggccttgcggctgcttcggaaggcaaca
gcactgcctgcccgccgggccgagtacttcgacggctcagagccagtgcagaaccgtgtg
tataagtcactgaaggtgtggtcgatgctcgccgacctggaggaaagcctgggcaccttt
cagtccaccaaggccgtgtatgaccgcatcctggatctgcgcattgccacgccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggca
tatgaacgtggcatctcactgttcaaatggcccaatgtgtccgacatctggagcacctac
ctgaccaagttcatcgcgcgctacgggggccgcaagctggagcgggcacgggacctcttt
gaacaggcgctggatggctgccctcccaaatatgccaagaccctgtacctgctgtacgcg
cagctggaggaggagtggggcctggcccggcacgccatggctgtgtacgagcgagccacc
agggccgtggagcccgcccagcagtatgacatgttcaacatttacatcaagcgggcagcc
gagatctacggagtcacccacacccgcagcatctaccagaaggccatcgaggtgctgtcg
gatgagcacgcccgtgagatgtgcctgcggtttgctgacatggagtgtaagctcggggag
attgatcgcgcccgggccatctacagcttctgctcccagatctgtgacccccggacaacc
ggggccttctggcagacgtggaaggactttgaggtccggcacggcaacgaggacaccatc
aaggagatgctgcggatccgccggagcgtgcaggccacctacaatacacaggtcaacttc
atggcctcacagatgctcaaggtgtcaggcagcgccacgggcactgtgtctgaccttgcc
cctggccagagtggcatggatgacatgaagctgctggagcagcgggctgagcagctggca
gccgaggctgagcgggaccagcccccacgggcccagaataagatcctgtttgtgaggagc
gacacctcccgggaggagctggcagagctggcacagcaagtcaaccctgaggagatccag
ctgggtgaggatgaggacgaggacgagatggacctggagcccaacgaggtccggctggag
cagcagagtgtgccagcggctgtgttcgggagcctgaaggaagactga
DBGET
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