Galeopterus variegatus (Sunda flying lemur): 103597685
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Entry
103597685 CDS
T08727
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gvr03041
]
103597685 (DDX1)
03016 Transfer RNA biogenesis [BR:
gvr03016
]
103597685 (DDX1)
Enzymes [BR:
gvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103597685 (DDX1)
Spliceosome [BR:
gvr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103597685 (DDX1)
Transfer RNA biogenesis [BR:
gvr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103597685 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
DEAD
Helicase_C
CMS1
DUF5766
ResIII
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
103597685
NCBI-ProteinID:
XP_008579774
UniProt:
A0ABM0RGN3
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAFSIPVIQIVYETLKD
QQEGKKGKTTIKTGGSVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMK
GKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHD
TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFP
PKDGFVALSKAPDSYVVKSQHTGNAQVSQTKFLPNAPKALIVEPSRELAEQTLNNIKQFK
KYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLD
EADGLLSQGYSDFINRMHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD
LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGANSPEMWSEAIK
ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQFSCVCLHGDRK
PHERKQNLERFKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV
EPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEKEAQTSFLHLGYLP
NQLFRTF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttctccgagatgggtgttatgcctgagattgctcaagctgtggaagagatg
gattggcttcttccaactgatatccaggctgaatctatcccactgatcctaggaggaggt
gatgtactgatggcttttagtattccagttatccagatagtttatgagactctgaaggat
caacaagaaggcaaaaaaggaaaaacaacaattaaaactggtggttcagtgcttaacaaa
tggcaaatgaacccatatgatagaggatctgcttttgcaattgggtcagatggtctttgt
tgtcaaagcagagaagtaaaggaatggcatgggtgtagagctactaaaggattaatgaaa
gggaagcactactatgaagtatcatgtcatgaccaaggactctgcagagttggatggtct
tctatgcaggcctcattagacctaggtactgacaagtttggatttggctttggtggaaca
ggaaagaaatcccataacaaacagtttgataattatggagaggaattcactatgcatgat
accattggatgttacctagatatagacaaagggcatgtcaagttctcaaaaaatggaaaa
gaccttggtctggcatttgaaataccaccacatatgaaaaaccaagccctctttcctgcc
tgtgttttgaagaatgctgaattaaaatttaacttcggtgaagaagaatttaagtttcca
ccaaaagatggttttgttgctctttccaaggcaccggatagttacgttgtcaaatcacag
cacacaggtaatgcacaggtgtcacaaactaagtttcttccaaatgctccaaaagctctc
atcgttgaaccctctcgggagttagctgaacaaactttgaataacatcaagcagttcaag
aaatatattgataatcctaaattaagggagcttctgataattggaggtgttgcagcacgg
gatcagctctctgttttggataatggggtggatatagtcgtgggcactccaggaagactg
gatgatttggtgtcaactggaaagctgaatttatctcaagttagattcctggtcctggat
gaagctgatgggcttctttctcaaggttattctgattttataaataggatgcacaatcag
attcctcagattacctctgatggaaaaagacttcaggtgattgtttgctctgctactttg
cattcttttgatgtaaagaaactgtctgagaagataatgcattttcccacatgggttgat
ttaaaaggagaagattctgttccagatactgtacaccatgttgttgtcccagtgaatccc
aaaactgacagactctgggagaggcttggaaaaaaccacattagaactgatgacgtacat
gcaaaagataacacaagacctggagcaaacagtccagaaatgtggtctgaagctattaaa
atcctgaagggggagtatgctgtccgggcaatcaaggaacacaagatggatcaagcaatt
atcttctgtagaaccaaaattgactgtgataacttggagcagtattttatgcaacaagga
ggaggacctgataaaaaaggacaccagttctcatgtgtttgtcttcatggtgacagaaag
cctcatgagagaaagcaaaacttggaaagatttaaggtttggtaccatgtatgtagcaac
cgtggaaaagggtgttataacacaagactcaaggaggatggaggctgtactatatggtac
aatgaaatgcagttgctgtctgagatagaagaacacctgaactgtaccatttctcaggtt
gagccagatataaaggtaccagtggatgaatttgatgggaaagttacctatggtcaaaaa
agggctgctggtggcggaaactataaaggccatgtggatattttggcacctaccgttcaa
gagttggctgcccttgaaaaggaggcgcagacatctttcctgcatcttggctaccttcct
aaccagctgttcagaaccttctga
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