Galeopterus variegatus (Sunda flying lemur): 103597699
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Entry
103597699 CDS
T08727
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03008
Ribosome biogenesis in eukaryotes
gvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103597699 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
103597699 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gvr03021
]
103597699 (XRN2)
03019 Messenger RNA biogenesis [BR:
gvr03019
]
103597699 (XRN2)
03009 Ribosome biogenesis [BR:
gvr03009
]
103597699 (XRN2)
03016 Transfer RNA biogenesis [BR:
gvr03016
]
103597699 (XRN2)
Transcription machinery [BR:
gvr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103597699 (XRN2)
Messenger RNA biogenesis [BR:
gvr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
103597699 (XRN2)
Ribosome biogenesis [BR:
gvr03009
]
Eukaryotic type
Pre-60S particles
RNases
103597699 (XRN2)
Transfer RNA biogenesis [BR:
gvr03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
103597699 (XRN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
DUF8363
Motif
Other DBs
NCBI-GeneID:
103597699
NCBI-ProteinID:
XP_008579788
UniProt:
A0ABM0RGP7
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECGGVKVPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPAVSPNASF
TSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADKKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGISDMSSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEEIRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEPMDVPPELCHGIQG
KFSLDEEAILPDQMVCSPVPMLRDLTQNTAVSVNFKDPQFAEDYIFKAVMLPGARKPAAV
LKPGDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGSGLYSNAAPPPVT
YQGNLYRPLLRGQAQIPKLMS
NT seq
2584 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggcgttcttccgctggctcagtcgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcggtggtgtaaaggttccagttgatgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcattcac
ccctgtactcatcctgaagacaaaccagcaccaaaaaatgaagatgaaatgatggttgca
atttttgaatacattgatagacttttcagtattgtaagaccaagacgacttctctacatg
gcaatagatggagtggcaccacgtgctaaaatgaaccagcagcgttcaaggcgattcaga
gcatctaaagaaggaatggaagcagcagtcgagaagcaacgagtcagggaagaaatattg
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgacagcaactgtatt
acaccaggaactgagttcatggataatcttgctaaatgtcttcgctattacatagctgat
cgcttaaataatgaccctggatggaaaaatttgacagttattttgtctgatgctagtgca
cctggtgaaggagagcataaaatcatggattacattagaagacaaagagcccagcctaac
catgacccaaatactcatcactgtttatgtggagcagatgctgatctcattatgcttggc
cttgctacacatgaaccaaactttaccatcattagagaagaattcaaaccaaacaaaccc
aaaccatgtggtctttgtaatcagtttggacatgaggttaaggattgtgaaggtttacca
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccttgcgcagagggagag
tttatcttccttcggcttaatgttcttcgtgagtatttggaaagagaactcaccatggct
agcctaccatttacatttgatatcgagaggagcattgatgactgggtcttcatgtgcttc
tttgtgggaaacgacttccttcctcacttgccatcgttagagattagggaaggtgcaatc
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacggcagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttcactcctagtggaatattaactcct
catgccttgggttcaagaaattcaccaggctctcaagtagccagtaatccgagacaagca
gcctatgaaatgaggatgcagaataactctagtcctgcagtatctcctaatgcaagtttc
acatctgatggctccccatctccactaggaggaattaaacgaaaagcagaagacagtgac
agtgaacctgagccagaggataatgtcaggttatgggaagctggttggaagcagcggtat
tacaagaacaaatttgacgttgatgcggctgataagaaattccgtcgtaaagttgtacag
tcttacgttgaaggactttgctgggttcttcgatattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgcaccatttgcttcagactttgaaggtatttcagat
atgtcttctgattttgagaagggtacaaaaccgtttaaaccactggaacaacttatggga
gtttttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgat
cccgattctagtataattgacttctaccctgaagattttgctattgatttaaatgggaag
aaatacgcgtggcaaggtgttgccttgttgccgttcgtggatgaacgaaggctgcgagct
gccctagaagaggtatacccagacctcactccagaagagatcagaagaaacagccttgga
ggtgatgtcttatttgtggggaaacaccacccactccacgacttcattttagaactgtat
cagacaggttccacagagccaatggatgtaccacctgagctatgtcatgggattcaagga
aagttttctttggatgaagaagctattcttccagatcaaatggtatgttctcctgttccc
atgttacgggatctgacacagaacactgcagtcagtgttaattttaaagacccacagttt
gctgaagattacatttttaaagctgtaatgcttccaggagcaagaaagccagcagcggta
ctaaaacctggcgactgggaaaaatccagtaatggacggcagtggaagccccagcttggc
tttaatcgggaccggcggcctgtccacctggatcaggcagccttcaggactttgggccat
gttatgccaagaggctcaggatctgggctttacagcaatgctgcaccaccacctgtcact
taccagggaaacttatacaggccactgttgagaggacaagcccagattccaaaactgatg
tcaa
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