Galeopterus variegatus (Sunda flying lemur): 103598827
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Entry
103598827 CDS
T08727
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103598827 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gvr04147
]
103598827 (COL18A1)
00535 Proteoglycans [BR:
gvr00535
]
103598827 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
gvr00536
]
103598827 (COL18A1)
Exosome [BR:
gvr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103598827 (COL18A1)
Proteoglycans [BR:
gvr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
103598827 (COL18A1)
Glycosaminoglycan binding proteins [BR:
gvr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103598827 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
DUF959
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
103598827
NCBI-ProteinID:
XP_008581101
LinkDB
All DBs
Position
Unknown
AA seq
1527 aa
AA seq
DB search
MALDPSGRFGLLLLFCCLVAARANLLGLDWLWSSRVTSPIAAPASEPQGGPPLQPTADAT
TTVAPRDGPQEQGTALASPELPLEELQGGQGRALTTQAAPATSSDTKEENIAGVGARILS
VAQGIQSFVQLWDSASPTENSAGAGTPAPKTPSSPFTHPGPSSSPQENGTPLWPSSDTPS
SPGTQRTTASTLQVPTQPPPSLGRLQAPLRGPPAPLPSPESFSEEVGLLQLLGEPPPQQV
TQVDDPDVGPAYIFGPDANSGQVARYHFPSPFFRDFSLLFHVRPATEHAGVLFAITDAAQ
AVVLLGVKLSGVQDGHRHVSLLYTEPGAAQTRTAASFRLPAQVGQWSRFALGVHGGLVTL
YLDCEEFQRLPFVRTRLMGFIPKSPLHEVSLAPEESDGMIAELRVRGDPQVSPLHCLDEE
DDDADGASGDFGSGLQESGERLTEGTATSLTPSLPQPPPVTPPPTEDSRAEVQEETTVVP
LAAQTLPGSDSVSTWDSRVQSAGVSLEKEGQKGQKGEPGARGLPGPVGPQGPACPVCPQS
PPGPISPQGPSGPDAQPVPRLQGPPGPPGLPGKDGAPGRDGALGDPGEDGRPGDIGPQGF
PGAPGDVGPKGEKGDSGIGPRGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFSGDLEALR
GPRGFPGPPGPPGVPGLPGEPGRFGVNSSDIPGPAGLPGVPGRDGPPGFPGPPGPPGPPG
REGKAGEHGQKGSLGEAGAPGPKGSKGDPGPAGPPGESGLAGTPGPAGPRGPPGPPGPPG
PGFAAGFDDMEGSGGPFWSTAQGSGGPQGLPGSPGLKGDPGTAGPPGAKGEVGADGAPGF
PGLPGREGTAGPQGPKGDKGSQGEKGDPGKDGVGQQGLPGPPGPPGPIVYVSEQDRAITS
VSGSEGRPGSAGFPGPAGPKGEPGSRGEQGFPGPKGEKGEPGSPFGPNGRALAPAQKGAK
GEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGP
PGPPGPPGTPVYDSNAFVESGRPGPPGLPGYQGPSGPKGDKGEVGPPGPPGQFPFDLLRL
EAEMKVREGLGGWGRGLPALPASDPSVCPPPGGRRPQGSLAQCGSRELSPILWPGYPGIP
GPKGESIRGQPGPPGPQGPPGIGYEGRQGAPGPPGPPGPPGPPSFPGPHRQTISVPGPPG
PPGPPGPPGSMGASSGVRVWATFQTMLDQLPDVPEGWLIFVAETEELYVRVRNGLRKVLL
EARVPLPHGSDNEVAALQPPVVRLHESNPYPRREHPPSTARPWRADDILASPPRLPEPQP
YPGAPHHSSYVHLQPARPTGIPTHTHQDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQA
RAVGLAGTFRAFLSSRLQDLYSIVRRADRGAVPIVNLKDEVLFPNWEALFSGSEGQLEPG
ARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLTESYCETWRTEATTATGQAASLLAGRL
LEQKAASCHNAYVVLCIENSFMTTASK
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgaccccagcggccgcttcggcctgctgctgctcttctgctgcctggtggct
gcccgggccaacctgctgggcctggactggctgtggtccagcagggtcaccagccccata
gctgcgccagcctctgagccccagggtggcccacccttgcaacccacagcggatgccacc
acgaccgtggccccccgagatggccctcaggagcaagggacagcccttgccagcccggag
ctgcccttggaggagctacagggtggccagggcagggccctcaccacccaggcggcccct
gccacgagctcggacacgaaggaggagaacatcgccggcgttggcgccaggatcctgagt
gtggcccagggcatccagagctttgtccagctgtgggacagcgccagccccactgagaac
tctgccggggcagggacaccagcccccaagaccccctcaagccccttcacccaccctggg
ccttccagcagcccccaggagaacgggacccctctctggccaagcagtgatactccaagc
tctccgggcacccagaggaccacagccagcaccctgcaagtgcccacacagccacctccc
tccctgggtaggctccaagctccactcagggggcccccagcgccactgccatccccagag
agcttcagtgaggaggtggggctgctgcagctccttggggagcccccaccccagcaagtc
acccaggtcgacgaccctgacgtggggccagcctacatctttggaccagatgccaacagc
ggccaggtggcccggtaccacttccccagccccttcttccgggacttctcactgctgttc
catgtccggccagccacggagcatgcaggcgtgctgttcgccatcacagacgcggcgcag
gcagttgtcttgctgggcgtgaagctctcgggggtgcaggacgggcaccggcacgtctcg
ctgctctacacggagccgggcgcagcccagacccgcacagctgccagcttccgcctgccc
gcccaggtcggccagtggtcgcgctttgcgctcggtgtgcatggtggcttggtgacactg
tacctggactgcgaggagttccagaggctgccgttcgtgcggacacgccttatgggcttc
atccccaagtctcccctgcatgaggtgtctctggcccctgaggagagcgacgggatgatc
gcagagctgagggtgcgtggggacccccaggtgagccccctgcactgcctggacgaggag
gacgatgatgcagacggggcgtccggagacttcggaagtggactgcaggagagcggagag
cgcctcacagagggaacggccacgtccctcacacccagcctcccccagcctcccccggtc
actcctccacccacagaagactccagagccgaagtccaggaagaaaccacggtggtgcca
ctagcagctcagacccttcctggctccgattcggtttccacatgggacagtcgtgtccag
agtgcgggggtcagcctggaaaaggaaggacagaaggggcagaagggggagccaggtgct
cggggcctgcctggcccagttggtccccagggtcctgcatgcccggtctgtccccagagt
cccccaggcccaatcagtccccagggtccctcaggcccggatgcacaacctgtccccagg
ctgcagggaccccctggacccccggggctgccggggaaggacggcgctccggggagggac
ggcgctctgggcgaccctggtgaagatggaagacccggggacattgggccacagggcttc
ccaggggctccaggagatgtaggtccgaagggcgagaagggggattctggcatcgggccg
agaggacccccaggaccccagggacctccggggcccccaggaccgtccttcagacacgac
aagctgaccttcattgacatggaggggtctggcttcagtggtgacctggaggccctcagg
ggcccgcgaggcttccccggccccccagggccccctggcgtcccaggcctgcccggcgag
ccaggccgctttggggtgaacagctctgacataccaggacccgcaggccttcctggggtg
cctgggcgggatgggcctcctggttttcccggccccccgggacccccaggccctccagga
agagaagggaaggcaggagagcacggccagaagggcagccttggtgaagcgggcgcccca
ggacccaagggaagcaagggggaccccggccctgctggccctcctggggagagcggtttg
gctggaacccctggcccagctggacctagagggccccctggcccccccgggccaccagga
ccgggatttgccgctggatttgatgacatggaaggctccgggggacctttctggtcaaca
gcccaaggctccggcgggccccagggactgcccggctcaccaggactcaagggtgatcct
ggaacagctggaccacctggggccaagggagaagtcggagcagatggagcccccgggttc
cccggcctgcccggcagagagggcactgctgggccccagggacctaaaggagataaaggg
agccagggagaaaaaggcgacccagggaaggatggagtgggacagcagggtctccccggg
ccacctggacccccagggcctatcgtctacgtgtcggagcaggatagagcgatcaccagc
gtgtcaggatctgagggccggccgggctctgcaggcttccccggacccgccgggcccaag
ggcgaaccgggctccaggggcgagcagggcttccctggacccaagggcgagaagggtgag
cccggcagccccttcggccccaatggcagagccctggcgcccgcccagaaaggagccaag
ggcgagccaggcttccgaggacccccgggtccatatggacggcctgggtacaagggagag
atcggctttcctggacggccgggtcgccccgggatgaacggattgaaaggagagaaaggg
gagccaggagacgccagcctcggatttggcatgaggggaatgcctggcccccctgggcct
ccagggcccccaggccctcccgggactcctgtgtacgacagcaacgcgtttgttgagtcc
ggccgccctgggcctccaggattgccaggataccaggggccttctggaccaaagggggac
aaaggagaagtgggcccgcctggaccaccagggcagttcccatttgacctgcttcgcttg
gaggctgaaatgaaggtgcgtgagggcctggggggctgggggagggggctgcctgcgctc
ccggcgtcagacccttctgtctgcccacccccaggagggcgccggccccaggggtccctg
gctcagtgtggcagcagggagctgagccccatcctgtggccaggctaccctgggattccg
ggtcccaagggagagagcatccggggccagcccggcccacctggacctcagggaccacct
ggcattggctatgaagggcgccagggcgctcctgggcccccaggcccccctggcccccca
gggcccccttcgtttcccggccctcacaggcagactatcagtgttcctggaccacctggc
ccacctggtcccccgggaccccctggatccatgggcgcctcctcaggggtgcgggtctgg
gccacgttccagaccatgctggaccagctgcccgacgtgcccgagggctggctcatcttt
gtggctgagacagaggagctctacgtccgggtccgcaatgggctgcggaaggtgctgctg
gaagcccgggtgccactcccacatgggtcggacaatgaagtggccgccttgcagccccct
gtggtgcggctgcatgagagcaacccatatccccggcgggagcaccccccctccacagca
cggccctggagggcggacgacatcctggccagtccccctcgcctgccagagccccagccc
taccccggagctccacaccacagctcctatgtgcacctccagccagcacgccccacaggc
attcccacccacacgcaccaggacttccagccggtgctccacctggtggcactcaacagc
ccgctatcgggcggcatgcgtggcatccgcggggccgacttccagtgcttccagcaggca
cgggctgtggggctggccggcaccttccgcgccttcctgtcctcgcggctgcaggacctc
tacagcattgtgcgccgcgcggaccgcggagccgtgcccatcgtcaacctcaaggatgag
gtgctgttccccaactgggaggccctgttctcaggctccgagggccagctggagcctggg
gcccgcatcttctcttttgatggcagagacgtcctaaggcacccagcctggcctcagaag
agcgtgtggcatggctcagaccccagcgggcgcaggctgacagagagctactgtgagacg
tggcggacagaggccacaacagccacgggccaggctgcctcgctgctggcaggccggctg
ctggagcagaaagccgcgagctgccacaatgcctatgtggtcctgtgcatcgagaacagc
ttcatgaccaccgcctccaagtag
DBGET
integrated database retrieval system
