Galeopterus variegatus (Sunda flying lemur): 103600959
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Entry
103600959 CDS
T08727
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103600959 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvr02000
]
103600959 (ABCA4)
Transporters [BR:
gvr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103600959 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_15
SRP54
AAA_29
DUF4162
Motif
Other DBs
NCBI-GeneID:
103600959
NCBI-ProteinID:
XP_008583547
LinkDB
All DBs
Position
Unknown
AA seq
1991 aa
AA seq
DB search
RGIRIRDILKDEEKLTLFLIKSIGLPDSVVYLLVNSQVRPEQFAHGVPDLVLKDIACSEA
LLERFIIFSQRRGAQTVRAAICPLSQVTLQWMEDTLYANVDFFKLFRVLPTLVDSSSQGI
NLRSWGRILSDMSPRIQEFTHRKSVQDLLWVTRLLMQGGGPETFPQLMGILSDLLCGYPE
GGGSRVFSFNWYEDNNYKAFLGIDSARKDPIYSYDKRTTAFCNALIQSLESNPLTKIAWR
AAKPLLMGKILFTPDSPAARRIMKNANSTFEELERFRKLVKSWEEVGPQIWYFFDKSTQM
TVIRDTLENPTVKGFVNRQLGEEGITAEAILNFLYRGPRDSRPDNMADFDWRDIFNITDR
TLRLVNQYLECLILDKFESYDDEVQLTHRALSLLEENRFWAGVVFPDMYPWTSSLPPHVK
YKIRMDIDVVEKTNKIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMLEQGITRSQAGAEA
AVGVYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKSIVLEKELRLKETLKN
QGVSNAVIWCTWFLDSFSIMSMSIFLLTIFIMVSSFFACLFLGDYGTPLPWFFLLQESYW
LGGEGCSTREERALEKTEPITEEMEDPENPGINDTFFERELPGLVPGVCVKNLVKIFEPY
GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLIGGKDIETSLDAI
RQSLGMCPQHNILFHHLTVAEHILFYAQLKGKSWEEARLEMEAMLEETGLHHKRNEEAQD
LSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMD
EADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRKSSEGTCMCAS
KGFSIRCPACVEEVTSEQVLDGDVNELMDVVCHHVPEAKLVECIGQELIFLLPNKNFKQR
AYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDSDSGHLFAGGTQQKRENVSLRH
SCLGPGGKATQTAQGCTTSSPAPAAPPQGQTPPETEDPGARRNTGARLFLQHVQALLVKR
FHHAVRSHKDFLAQIVLPATFVFLALLLSIIIPPFGEYSSLTLHPWMYGQQYTFFSLDEP
GSERFVVLADVLLNRPGFGNRCLKEEWLPEYPCGNSTPWQTPSVSPNITRLFQEQKWTPD
NPSPSCRCSTREKLTMLPECPEGAGGLPPPQRTQRSTEILQDLTNRNISDFLVKTYPALI
RSSLKSKFWVNEQRYGGISIGGKLPVVPITGEALVGFLSELGKIMNVSGGPITREASKEM
SDFLKHLETEDNIKVWFNNKGWHALVSFLNVAHNAILRASLKEDKSAEEYGITLISHPLN
LTKEQLSEITVLTTSVDAVVAICVIFAMSFVPASFVLYLIQERVNKAKHLQFISGVSPPT
YWLTNFLWDIMNYAVSAGLVVGIFIGFQKKAYTSPQNLPALVALLMLYGWAVIPMMYPAS
FLFDVPSTAYVALSCANLFIGINSSAITFILELFETNRTLLRLNAMLRKLLVIFPHFCLG
RGLIDLALSQAVTDVYARFGEEHSSNPFQWDLIGKNLVAMAVEGVVYFLLTLLIQHHFLL
TQWTAAPAKEPIVDEDEDVAEERQRILSGGNKTDILSLNELTKVYSGTFSPAVDRLCVGV
RPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQNMGYCPQFDA
IDDLLTGREHLYLYARLRGVPAEEIDRVTNWSIQSLGLSLYADCLAGTYSGGNKRKLSTA
MALIGHPPLVLLDEPTTGMDPQARRMLWNIIVGIIREGRAVVLTSHSMEECEALCTRLAI
MVKGTFQCLGTIQHLKSKFGDGYVVTMKIRSPKDDLLPDLNPVEQFFQGNFPGSVQRERH
YNMLQFQVSSSSLARIFQLLISHKDSLLIEEYSVTQTTLDQVFVNFAKQQTETHDLPLHP
RAAGASRQAKA
NT seq
5978 nt
NT seq
+upstream
nt +downstream
nt
gaagaggcatacgaattcgggatatcctaaaagatgaagaaaaactgacactatttctca
taaaaagcattggcctgcctgactcagttgtctaccttctggtcaactcccaagttcgtc
cagagcagtttgctcatggagtcccagacctggtgctgaaggacatcgcctgcagtgagg
ccctcctggagcgcttcatcatcttcagccagcgacgtggggcacagaccgtgcgtgccg
ccatctgccccctctcccaggtcaccctgcagtggatggaagacactctgtatgccaacg
tggacttcttcaagctcttccgtgtgcttcccacactcgtagacagcagttctcaaggta
ttaatctgagatcctggggaaggatattatctgatatgtcaccaagaattcaagagttta
cccatcggaagagtgttcaagacttgctgtgggtgaccagactgctcatgcagggtggcg
gcccagagactttcccgcagctgatgggcatcctgtctgacctcctgtgtggctacccag
agggaggaggctctcgggtgttctccttcaactggtatgaagacaataactataaggcct
tcctggggattgactctgcaagaaaagatcctatctattcttatgataaaagaacaacgg
ccttttgtaatgcattgatccagagcctggagtctaatcctttaaccaaaatagcctgga
gggcagcaaagcctttgctgatgggaaaaatcctctttactccagattctcctgcagcac
gaaggataatgaagaatgccaactcaacttttgaagaactggagcgctttaggaaattgg
tcaaatcctgggaagaagtaggacctcagatctggtacttctttgacaagagcacacaga
tgaccgtgatcagagacaccctggagaacccaacagtaaaaggctttgtgaacaggcagc
tcggtgaagaggggattactgccgaagccatactaaacttcctctacaggggtcctcgag
acagccggccggacaacatggccgactttgactggagggacatatttaacatcactgatc
gcactctacgcctggttaatcaatacctggagtgcttgatcctggataagtttgaaagct
acgatgatgaagttcagctcacccatcgagccctgtctctgctggaggaaaacaggttct
gggctggtgtggtgttccctgacatgtatccctggaccagctctctaccaccccacgtga
agtacaagatccggatggacatagacgtggtggagaaaaccaacaagatcaaagacaggt
actgggactctggtcccagagctgatcccgtggaagatttccgatacatctggggagggt
ttgcctatctgcaggacatgcttgaacagggcatcacaagaagccaggctggggctgaag
ctgcagttggagtctatctccagcagatgccatacccctgctttgtggatgactctttta
tgatcatcctgaaccgctgtttccctatcttcatggtgctggcatggatctactctgtct
ccatgactgtaaagagcatcgtcttggagaaggagttgagactgaaggagaccttgaaaa
atcagggtgtctccaatgcagtgatttggtgtacctggttcctggacagcttctccatca
tgtcaatgagcatcttcctcctgacgatattcatcatggtttcctctttctttgcctgtc
tctttttaggggactatggaaccccacttccttggttcttccttctacaagagtcctatt
ggcttggtggtgaagggtgttcaaccagagaagaaagggccctggaaaaaaccgaaccca
taacagaggagatggaagatccagaaaacccaggaataaacgacaccttctttgaacgtg
agcttccaggtttggttcctggggtatgtgtgaagaatctggtaaagatttttgagccct
atggccggccagctgtggaccgtcttaacattaccttctacgagaaccagatcacagcgt
tcctgggtcacaatggagcagggaaaaccaccacgttgtctatcctgacaggtctgttgc
caccaacatcagggactgtgctcattgggggaaaggacattgaaaccagcctggatgcca
tccgacagagccttggaatgtgtccgcaacacaacatcctgttccaccacctcacggtgg
ctgagcacatcctgttctatgcccagctgaagggcaagtcgtgggaggaggcccgcctgg
agatggaggccatgctggaggagacaggcctccaccacaagaggaatgaagaagctcagg
acctgtcaggtggcatgcagaggaagctctctgttgccattgcctttgtgggagatgcca
aggtggtcgtcctggacgagcccacctctggggtggacccctattcaagacgctccatct
gggacctgctcctgaagtatcgctcaggcagaaccatcatcatgtccactcaccatatgg
acgaggcagacctccttggggaccgcatcgccatcatttcccagggaaggctctactgct
cgggcaccccgctcttcctgaagaactgctttggcacaggcttctacttaaccttggtgc
gcaagatgaaaaacatccagagccaaagaaaaagcagcgaggggacctgcatgtgtgcat
ctaagggcttctccatcaggtgcccagcctgtgtcgaggaggtaacttcagaacaggtct
tggacggggacgtgaatgagttgatggatgtggtttgccaccacgttccagaggcaaagc
tggtggaatgcattggtcaggaacttatcttccttcttccgaataagaatttcaagcaga
gagcatacgccagccttttcagagagctggaggagacgctggctgacctggggctcagca
gctttggaatttctgacactcccctggaagagatttttctgaaggtcacggaggattctg
actcgggacatctgtttgctggtggcactcagcagaaaagggaaaatgtcagcctccgac
actcctgtttgggtcctggcgggaaggccacacagactgcccagggctgcaccaccagct
ccccagcaccagctgctcctccccagggccagacccccccagagacagaggaccctggcg
cccggcgcaacacgggagcaaggctcttcctccagcacgtgcaggcactgctggtcaagc
gattccaccacgccgtccgcagccacaaggatttcctggcccagattgtactcccggcca
ccttcgtgtttttggctctgttgctttccatcatcatccctccttttggtgaatattcct
cgttgaccctccatccgtggatgtatgggcagcaatacaccttcttcagcttggacgagc
cgggaagtgagcgcttcgtggtacttgcagacgtcctcctgaacaggccaggctttggca
accgctgcctgaaggaagaatggcttccggaatacccctgtggcaattcaaccccctggc
agactccttctgtgtctccaaacatcacccgcctattccaggagcagaaatggacaccag
acaacccctcaccttcctgcaggtgcagcaccagggagaagctcaccatgctgcctgagt
gccccgagggtgccgggggactcccgccccctcagagaacgcagcgcagcactgaaattc
tacaagacctcacgaacaggaacatctccgacttcttggtaaaaacgtaccctgctctta
taagaagcagcttaaagagcaaattctgggtcaacgaacagaggtatggaggaatttcca
tcggaggaaagctcccggttgtccccatcactggggaagcccttgtgggttttttaagcg
aacttggcaagataatgaatgtgagcgggggccctatcaccagagaggcctcaaaagaaa
tgtctgatttccttaaacatctggaaactgaagacaacattaaggtgtggtttaacaaca
aaggctggcatgccctggtcagctttctcaacgtggcccacaatgccatcttgcgggcca
gcctgaaggaggacaagagcgccgaggagtacgggatcaccctcatcagccaccccctga
acctgaccaaggagcagctctcagagattacagtgctgaccacttcggtggatgccgtgg
ttgccatctgtgtgattttcgccatgtccttcgtcccagccagcttcgtcctctatttga
tccaggagagggtgaacaaggccaagcacctccagtttatcagtggagtgagccccccca
cctactggctgaccaacttcctctgggacatcatgaattatgctgtcagtgctggattgg
tggtgggcatcttcatcggctttcagaagaaagcctacacctctccacagaatcttccag
cccttgtcgcactgctcatgctgtatgggtgggcagtcattcccatgatgtacccagcat
ccttcctgtttgatgtccccagcacagcctatgtggctttgtcttgtgctaatctgttca
tcggcatcaacagcagtgccatcaccttcatcttggaattatttgagacgaaccggacgc
tgctcaggctcaacgccatgctgaggaagctgcttgtcatattcccccatttctgcctcg
gccgaggcctcattgacctggcgctgagccaggctgtgacagacgtctatgcccggtttg
gtgaggagcactcttcaaatccgttccagtgggacctgatcgggaagaacctggtggcca
tggcggtggaaggggtggtgtacttcctcctgaccctcctcatccagcaccacttcctcc
tcacccagtggactgccgcgcccgctaaggagcctattgttgatgaagatgaggacgtgg
ctgaagaaagacaaagaattcttagtgggggaaataaaactgatatcttaagtctaaatg
aactaaccaaggtttactcaggcaccttcagcccagcggtggacaggctgtgtgtcggag
tccgccctggagagtgctttggcctcctgggagtgaatggtgctggcaaaacaaccacat
tcaagatgcttactggggacaccacagtgacctcaggcgatgccactgtagcaggcaaga
gtattttaaccaatatttctgacgtccatcaaaacatgggctactgtcctcagtttgatg
caatcgatgacctgctcacagggcgagaacatctttacctttacgcccggctccgaggtg
taccagcagaggaaattgacagggttaccaactggagtattcagagcctgggcctgtctc
tctacgcagactgcctggctggcacgtacagcgggggcaataagcgcaaactctccacag
ccatggcacttatcggccacccgccactggtgttgttggatgagcccaccacggggatgg
acccccaggcacgccgcatgctgtggaacatcattgtgggcatcatcagagaagggagag
ccgtggtcctcacatcccacagcatggaagaatgtgaggcactgtgtacccggctggcca
tcatggtgaagggcaccttccagtgtctgggcaccattcagcacctcaagtccaagtttg
gagatggctatgttgtcacaatgaaaatcaggtccccgaaggacgacctgcttcctgacc
tgaatcccgtggagcagttcttccaggggaacttcccaggcagtgtgcagagggagcggc
actacaacatgctgcagttccaggtctcctcctcctccctggccaggatcttccagctgc
tcatctcccacaaggacagcctgctcatcgaggagtactcggtcacgcagaccactctgg
accaggtatttgtgaattttgctaaacagcagactgaaactcatgacctccctctgcacc
ctcgagctgccggagccagccgtcaagccaaggcgtga
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