Galeopterus variegatus (Sunda flying lemur): 103601051
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Entry
103601051 CDS
T08727
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103601051 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gvr03019
]
103601051 (PNLDC1)
Enzymes [BR:
gvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103601051 (PNLDC1)
Messenger RNA biogenesis [BR:
gvr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103601051 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
103601051
NCBI-ProteinID:
XP_008583653
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MDVGADEFEQSLPMLQELVLGADFVGLDIEFTGLRSNLAGPQQISLFDLPSEWYLKTRQS
VQQFTVCQIGLSVFSCIEGESNKYVAHSCNFFLFPTTFGILDSEFSFQASSVQFLNQYGF
NYNKFLKNGIPYMNEEQEKKIKRNILTGNWRVRSFPDKDQIKVVIDEVTQWLDLAEEGDW
MTLPGIAGLRAFEVQLVLRQALPNIWTVLQDEGSESYDQFKQNIHNLFPVLIDTKNVTKD
IWKELNFPRVSNLSEVYKVLNSDLNPTKNSGPVIIHARKCEKYVGMEYPHEAAYDAFLCG
SVLLKVAHLLLQRLHGNSPIPEPCFSQYLHVLAPYVNQVNLIRAGVPKINFPGPDYPSIR
PPILILSVRKWLGVSEQQVYHEFHNLCKFDVRRLTRSQFLLLTNKFKDLRNVLKEYRGHP
TLQLSVYRYWRHSPNVNCLLQVCGIVTTWAVLAFLLGRPSP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgccgacgagttcgagcagagcctcccgatgctgcaggagctcgtcctg
ggcgccgacttcgtgggtctggatatagagttcactggccttcgttctaacttggctggg
ccccagcagatcagtctttttgatttgccatcggagtggtatctaaagacccgtcaaagt
gttcagcaatttacagtctgtcagattggattgtctgtgttttcctgtattgaaggagag
tcaaacaagtatgtagcccattcatgtaacttctttctctttcctacaacatttggaatt
ttggattcagaattctctttccaggcttccagtgtccagtttttgaatcagtatggcttc
aactataacaagtttcttaaaaatggaatcccatatatgaatgaagaacaggagaagaaa
attaaacgcaatatcctgacggggaattggagagttcgcagctttccagataaagaccaa
atcaaggtggtgattgatgaagtgacacagtggttggacctggccgaagaaggcgactgg
atgactctcccgggtattgctgggttgcgggcctttgaggtccagttggtgctaaggcag
gccctccccaacatctggacagtgctgcaagatgaagggtcagaaagctacgatcaattt
aagcagaatatccacaacctatttcctgttctcattgataccaagaatgtgacaaaggat
atctggaaggaactgaattttccaagggtttcaaacctttcagaagtgtacaaagtcctg
aacagtgacttaaatcccaccaagaattctggaccagtgattattcacgcaaggaaatgt
gaaaaatatgttgggatggagtacccccacgaagcagcgtatgacgccttcctctgtgga
tcagttcttttgaaagtggcacacttgctcctgcagaggttgcacggcaacagccccatc
cctgagccctgcttttcccagtacctccatgtgctggctccttacgtgaaccaagtgaat
ctcatccgagctggggtccctaaaatcaattttcctggtcctgattatcccagtatccgg
ccccccatcctcatcctcagtgtcaggaagtggcttggggtcagtgagcagcaggtctac
cacgagtttcacaatctctgcaagtttgatgtcaggcgactcacacgaagccagttcttg
ctgctgaccaataagtttaaggatctgcggaatgtcctgaaggagtacaggggccacccg
accctgcagctctccgtgtatcggtactggagacattccccaaatgtcaactgcttgttg
caagtctgtggcatcgtcaccacctgggctgtgcttgcatttctgctcggaagacccagc
ccctga
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