Galeopterus variegatus (Sunda flying lemur): 103601961
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Entry
103601961 CDS
T08727
Symbol
SPG11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr05014
Amyotrophic lateral sclerosis
gvr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103601961 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
103601961 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gvr03400
]
103601961 (SPG11)
DNA repair and recombination proteins [BR:
gvr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103601961 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
103601961
NCBI-ProteinID:
XP_008584581
LinkDB
All DBs
Position
Unknown
AA seq
1754 aa
AA seq
DB search
MIIDAELCRGTFFVLSSLGWINIFDVMDGTHIAHVDLSLHQEDMCNEQQQEPAKISSFTS
LKVSQDLDVVVIIGSSNSAVALNLNLYFRQHPGHLLCERILEDIPIQGPKGIDEDDPVNS
EYNMKLTNFSFQVDRSWKAQLSSLNETIKSSKLEVSCCAPWFQDLLHLESPESGNHRTSV
LHCAFSSQDIMHGQYNFPQKDHAKTSDLGRSWKIVHISEEEEPIELKCLSVTGFTALFTW
ALERMGCTIVLWDLETQDIQCFSFGKKCIPVDSSGDQQLCLVLTENGLSLILFGLTQEEF
LNRLMIHGSTSTVDSLCHLNGWGRCSIPIHALEAGIENRQLDTVDFFLKSKENLFNPSSK
SSVPDQFEHFPSHLYLRNVEELTPALDLLCSAIRESDSETQSKHFSEQLLNVTLSFLNKQ
IKELFIYTEELDEHLQKGVDILTRYINELRTFMIKFPWKLTDAVDEYDVNENVPKVKDNE
IWEKLSCEEVISNAILNNKIPEAQTFFRIKRHSAQRLEDLIRIGLDLVFDSLKKNNIKEA
SELLKNMGFDVKDQLLKICFYTTDKNIRDFLVEILKEKNYFSEKEKRTIDFVHQVEKFYS
GHFQENMQIQSFPRYWIKEQDFLKHKCVLDSFLKCDHKDEFNKQNHRIVLNWAQWWDQIT
EESILLPRISPEEYKSYSPDALWRYLTAHHDWLSIILWTGEFQTQNSYVSLQQNKWPPLT
VDVIDQNTCCNSYMKNKILDMLARNGIFLASELEDFELYLLRLSRIGGVIQDTLPVQNYK
TKEGWDFHSHFILYCLEHSLQYLLYVYLDCYKLSPENCLFLEKKELHEAHPWFEFLVQCR
QVSSNLTDPKLIFQASLANAQILIPTNQAGVSSMLLEGHTLLALATTMYAPGGVSQVVQN
EENENCLKKVDPQLLRMALTPYPKLKTALFPQCTAPSVLPPDITLYHLIQSLSPFDPSRL
FGWQSANTLAIGDASSHLPHFSSPDLVNKYAIVEHLNFAYYLHHGRPSFAFGTFLVQELT
KSKTPKQLIQQVGNETYVLGLSSFHIPSIGAACVCFLELLGLDSLKLRVDMKVANIILSY
KCRNEDAQYSFIRESLAEKLSKLASGEKATIKELLVLLEEGTWNSIQQQKIKRLSSEASS
QWALVVQFCRLHDMKLSTSYLRECAKANDWLQFIIHSQLHNYHLEEVKSLLQCFSPILQD
HLRLAFENLPSVSNSRVDSDQVCNKSPQELQKNKEEMTGFFEILLQCSEEPHSWRWLLAE
AVKQQAPILSVLASCLQDDSVIPCLCVWIITSVEESVAAEATRHIQGLIEGHTWDLEDLS
VIWRTLLTRQKSKTLIRGFQLFFKDSPLLLMMEIYELCMFFKNYKEAEAKLLEFQKSLET
FDVAATRIPPVIPATWLKDQVCFLLKVMLQQCKTQYELGKLLQLLVGIEHFFSDGPDVKK
LCVLSQILKDTSIAINHVIITSYSIENFQHECISILERLQTDGQFTLARRVAELAELPVD
NLVIKEIAQEMQTLKHIKQWSLKQARVDFWKKCHENFKKNSISSKAASSFFSAQASVGCE
HPTGLSSIEERHLLLTLAGHWLSQEDLVSLDKLEELEKEIWLCRITQHTTGGNQEETEPI
FSRQVSASGELSFDSLASEFSFSKLAALNSSKYLELNGLPSQETCVNRLDWKEQETLNFL
IGSLLDDGCVHEASRVCRYFHFYNQDVALVLHCRALASGEASVDDLHPEIHALLQSAEMP
AEEETGIPLRKVQS
NT seq
5263 nt
NT seq
+upstream
nt +downstream
nt
atgattattgacgcagagctctgcaggggaactttttttgttttgagtagtttaggctgg
atcaacatttttgacgttatggatggtacacatatagctcatgtggatttatcacttcac
caagaagatatgtgtaatgagcagcaacaggagccagccaagatttcttcctttacttca
ctgaaagtatctcaggacctagatgttgtagtgattatcggctcctccaactctgcagtt
gctcttaacttaaatttgtatttccggcaacacccaggacacctactatgtgaaagaata
ctagaagacattcctattcaaggacctaagggaatagatgaagatgatcctgttaactct
gaatacaacatgaaactgaccaacttttccttccaggttgataggtcttggaaagcccag
ctgtcatcattgaatgaaacaataaagagctccaaactggaagtttcctgttgtgctcca
tggtttcaggatcttttgcatttggagtcccctgaatctggtaaccacagaaccagtgtg
ttacactgtgctttcagttcacaggatataatgcatggccagtataattttccacagaaa
gatcatgccaagaccagtgatctgggaagatcatggaagatagtgcacatcagtgaagaa
gaggaacccatagagcttaaatgtctatctgtgacaggattcactgcactgtttacttgg
gctttggaaaggatgggctgtaccattgtcctctgggatttggagacccaggatatacag
tgtttttcctttggcaaaaagtgtattcctgtagacagtagtggagaccagcaactgtgc
cttgttttgacagaaaatggactctctctgattttgtttggtttgactcaagaggagttt
ttaaacagactaatgattcatggaagtaccagcactgtggactctctttgtcatctcaat
ggttgggggaggtgctcaattcccatacatgctctagaggctgggatagaaaatcgtcag
ctggacacagtagatttctttttgaagagcaaggaaaatctttttaatccatcctcaaaa
tcttctgtacctgatcagtttgagcactttccatcccatttatatttaagaaatgtggaa
gagctgacaccagcattggatttactttgctcagcaattagagaaagtgattctgaaacc
cagagcaaacatttttcagaacaattgcttaatgttacactgtctttccttaacaaacaa
ataaaggagctttttatttacactgaagagctagatgaacatctgcagaaaggagtggac
attttgaccagatacattaatgaacttcgaactttcatgataaagtttccctggaaacta
acagatgctgtagatgaatatgatgtaaatgaaaatgtccccaaagtcaaggacaatgaa
atatgggagaaactcagctgtgaggaagttatttccaatgccattttaaacaacaaaata
ccagaggcacaaaccttcttcaggattaagaggcattctgctcaaagactcgaggatctg
attagaataggcctagatttggtctttgacagtttgaaaaagaacaatataaaggaagcc
tctgaacttttgaagaatatgggctttgatgtaaaagatcagttgctcaagatatgcttc
tatacaactgataaaaacatacgggactttttggttgaaattttaaaagaaaaaaattat
ttttccgaaaaagaaaaaagaactatagactttgtgcatcaagttgagaaattttattca
ggacatttccaagaaaatatgcagatccagtcctttcccaggtattggataaaggagcaa
gattttctgaagcacaaatgtgttttggactcattcctgaaatgtgatcataaagatgaa
ttcaacaaacagaaccatagaattgtgttaaattgggctcagtggtgggatcaaataaca
gaagaatccatccttctccccaggataagtccagaagaatacaaatcatattcccctgac
gccctctggagatacctcacagctcaccatgattggttaagcattatcttgtggactgga
gaatttcagacccagaatagttatgtctcacttcagcagaacaaatggccccctctgact
gttgatgttattgatcagaatacttgctgcaacagctacatgaagaataaaattttagat
atgctcgcaaggaatgggatttttcttgcatctgaactagaagactttgaactctacctc
ctaagactgagtcgtattgggggtgtgatacaagataccctccctgttcaaaactataag
accaaagaaggttgggatttccattctcacttcattctctattgtttggagcacagtctg
cagtatcttctttatgtctatctcgactgttacaaacttagtcctgaaaattgtctcttt
ttggaaaaaaaagagttacatgaagcacatccttggtttgaatttttagttcagtgtcga
caagtttccagtaatttaacagatcccaaactgatcttccaggctagtcttgcaaatgca
cagattttgattcccaccaatcaggccggtgtaagcagtatgttattggaaggacatact
ctcctggcccttgctactacaatgtatgctcctgggggtgtcagccaggtggttcagaat
gaagaaaatgagaactgtttgaagaaagtggatccccagctactgaggatggcattaact
ccttaccccaagctaaaaactgctctcttcccacagtgcactgctcctagtgtcctgcca
cctgatattacactctaccaccttattcagtcattatcgccctttgatcctagcagattg
tttggctggcagtctgccaacacactagctataggagatgcatcgagtcatctcccacat
ttctctagccctgacctggttaataaatatgctattgtggaacatctgaattttgcttat
tatttacatcatggacggccatcctttgcatttggtacttttctggtccaggagttaacc
aagagcaagactcctaagcagctgatccagcaagtaggcaatgaaacctatgttttaggg
ctttcctccttccacataccttcaataggagctgcctgtgtttgtttcttagaattgctt
ggccttgacagcctcaagctcagagttgatatgaaagtagccaatataattttgagctac
aagtgtagaaatgaagatgctcaatacagttttatcagagaatcactagctgaaaaacta
tctaaactagccagtggtgaaaaggcaactataaaagaattgcttgttctcttagaagaa
ggtacatggaacagcattcagcagcagaaaataaagaggttatccagtgaagctagcagc
caatgggcattagtggtccagttctgcaggctccacgatatgaaactgagtacgtcttac
cttagagaatgtgccaaagcaaatgattggctacagtttattattcacagccaactccat
aactaccacctagaggaggtgaaatcccttctccagtgcttcagcccaatccttcaagac
cacttaaggctggcttttgagaacttgccctcagtgtccaactccagagtggacagtgat
caagtctgcaacaagtcaccccaggaactccagaaaaacaaggaagagatgactggtttc
tttgaaattctgcttcagtgctcagaggagccacattcctggcgctggctcctggctgag
gcagtgaaacaacaggcccctatcctcagtgtcctggcctcatgtctccaggatgacagt
gttattccttgtctttgtgtttggatcatcacttctgtggaggaaagtgttgcagctgaa
gcaacaagacacattcagggcttgatagagggccacacctgggaccttgaggacctttca
gtcatctggagaacattattaacaaggcagaagagcaaaactctcatcagaggtttccag
ctattctttaaggattccccattactcttgatgatggagatatatgaactatgcatgttt
ttcaagaattataaggaagctgaagctaaacttctggagttccagaaaagccttgaaact
tttgacgtggcagccacaaggatcccccctgtcatccctgccacatggctgaaggatcag
gtgtgtttccttttgaaggttatgctacagcagtgtaagacccagtatgagctggggaag
cttttacagctgttagttggaatagagcatttcttctctgatggtccagatgtgaagaag
ctgtgtgtccttagccaaattttgaaggatacatccatagccattaatcatgtaattatt
accagctacagcattgagaattttcagcatgaatgtatatcaattttggaaagactgcag
acagatggacagtttactttggccaggagggtagcagaattagctgagttacctgtggac
aacttggttattaaagagatagcacaggaaatgcagaccctaaaacacattaaacagtgg
tccctgaaacaagcaagagttgacttctggaaaaaatgccatgagaattttaagaaaaat
tccatttcaagcaaagcagcttcttcctttttctcagcccaagcctctgtgggatgtgag
cacccaactggactgagcagcattgaggaacgccatcttctgctcaccctggcagggcac
tggctttcccaggaggatctggtgtccttggataagctggaagagctggagaaggagata
tggctctgccgcatcacccagcacaccactggaggaaaccaggaggaaacagagcccata
ttttctcgacaggtctcagctagtggcgaactctcctttgacagcttagccagtgagttt
tccttctcgaagttggctgctctgaactcatcaaaatacttagaacttaatgggcttcca
tcccaagagacatgtgtgaatagactggattggaaggaacaggagacactaaactttttg
attgggagcctattggatgatggctgtgtgcatgaagcaagtagagtatgccggtatttt
catttctataaccaagatgttgcgttggtgttgcactgcagagcactggcctcaggagaa
gctagtgtggatgacctgcatccagagatccatgctcttctacaaagtgctgagatgcct
gcagaagaagagactggcattcctctaaggaaagtccaaagca
DBGET
integrated database retrieval system
