Galeopterus variegatus (Sunda flying lemur): 103602958
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Entry
103602958 CDS
T08727
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr04140
Autophagy - animal
gvr04148
Efferocytosis
gvr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103602958 (VPS39)
04148 Efferocytosis
103602958 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103602958 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gvr04131
]
103602958 (VPS39)
Membrane trafficking [BR:
gvr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
103602958 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
WD40_like
Lgl_C
SAM_CEP-1_C
DUF4145
Motif
Other DBs
NCBI-GeneID:
103602958
NCBI-ProteinID:
XP_008585639
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHKETGE
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKGLAIPYLEHIIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRQKLLMFLEIS
SYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQNK
DGNKDVYLSLLRMYLSPPSIHCLGPIKLDLLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgctttcgagccggtgccgatcttagaaaagctgcctctgcagattgactgt
ctggctgcctgggaggaatggcttcttgttggtaccaaacaaggacatcttcttctctat
aggattcggaaggacgttggttgcaacaggtttgaagtgacactagagaaatccaataag
aacttctccaagaagattcagcagatccatgtggtttcccagtttaagattctggtcagc
ttgttagaaaataacatttatgtccatgacctcttgacatttcaacaaatcaccacagtt
tcaaaggcaaagggagcatcacttttcacatgtgacctccagcacaaggagaccggtgag
gaggtgttgcggatgtgtgtggcagtgaaaaagaaactgcagctctatttctggaaggac
agagaatttcatgaattgcagggggactttagtgtacccgatgtgcccaagtccatggca
tggtgtgaaaattctatctgtgtgggtttcaagagagactactacctaataagggtggat
ggaaaggggtccatcaaagagctctttccaacaggaaaacagctggagcccttagttgcg
cctctggcagatggaaaagtggctgtgggtcaggatgatctcaccgtggtgctgaatgag
gagggaatctgcacacagaaatgtgccctgaactggacagacataccagtggccatggag
caccagcctccctacatcatcgcagtgttgcctcgatatgtggagattcgaacatttgag
ccaaggcttctagtccagagcattgaattgcaaagaccccgttttattacctcgggagga
tcaaacattatctatgtggccagcaatcattttgtttggagactcattcctgtccccatg
gcaacccaaatccaacagcttctccaggacaagcagtttgaactggctctgcagcttgca
gaaatgaaagatgactctgatagtgaaaagcagcagcaaattcatcacatcaagaacttg
tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaag
cttggcacagatcccacccatgtgatgggcctgtaccctgacctgctgcccacagactac
aggaagcagttgcagtatcctaacccgttgcctgtgctctccggagctgaattggagaag
gctcacttagctctgattgactacctgacacagaaacgaagtcaactggtaaagaagtta
aatgactctgaccatcagtccagcacctccccgctcatggaaggcactcccaccatcaaa
tccaagaagaagctgctgcagatcattgacaccaccctgctcaagtgctacctccatacg
aatgtggccctggtagcccccttgttgcgcttggagaacaatcactgccacattgaggag
agtgagcatgtgctgaagaaggctcacaagtacagtgagctgatcatcttgtatgagaag
aaggggctccacgagaaagctctacaggtgctggtagaccagtccaagaaagctaactca
cctctgaaaggccatgagaggacagtgcagtatctacaacatctgggcacagaaaacctg
catttgattttttcctactcagtgtgggtgctgagagacttcccagaagatggcctgaag
atatttacggaagatctcccagaggtggaatctctgccacgagatcgtgtgcttggcttc
ttaatagaaaattttaagggtctggctattccttatctggaacacatcatccacgtctgg
gaggagacgggctctcggttccacaactgcctgatccagctgtactgtgagaaggtgcaa
ggtctgatgaaggagtatctcctatccttccccgcaggcaaaactccagtccctgctgga
gaggaagagggtgagctgggagaataccggcaaaagctccttatgttcttggagatttcc
agctactatgatccaggccggctcatctgtgattttccttttgatggcctcttagaagaa
cgagctctcctgttggggcgcatggggaaacatgagcaagctctctttatctatgtccac
atcttgaaggatacaaggatggccgaggagtactgccacaaacactatgaccaaaacaaa
gatggcaacaaagatgtgtatctgtccctgcttcggatgtacctgtcgccccccagcatt
cactgcctggggccaatcaagctcgatctgctggagccacaagccaacctccaggccgcc
ctgcaggtccttgagctgcaccacagcaaactagacaccaccaaggctatcaaccttctg
ccagcaaacactcaaatcaatgacatacgcatatttctggaaaaggtcttggaagaaaat
gcacaaaagaaacggttcaatcaagtgctcaagaacctactccatgcagagttcctgagg
gtccaggaagagcggattttacaccagcaggtgaagtgcatcatcaccgaggagaaggtg
tgcatggtgtgtaagaagaagattgggaacagtgcatttgcaagataccccaatggagtg
gttgtgcactacttctgttccaaggaggtaaacccggctgacacctga
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