KEGG   Galeopterus variegatus (Sunda flying lemur): 103606419
Entry
103606419         CDS       T08727                                 
Symbol
SMU1
Name
(RefSeq) LOW QUALITY PROTEIN: WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
gvr  Galeopterus variegatus (Sunda flying lemur)
Brite
KEGG Orthology (KO) [BR:gvr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gvr03041]
    103606419 (SMU1)
Spliceosome [BR:gvr03041]
 Complex B
  Other components
   Complex B specific factors
    103606419 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd LisH_TPL Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_HPS5 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_BBS7 Beta-prop_VPS8 Beta-prop_WDR75_2nd VPS8_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_IP5PC_F DUF7165 LisH zf_topless
Other DBs
NCBI-GeneID: 103606419
NCBI-ProteinID: XP_008589245
LinkDB
Position
Unknown
AA seq 521 aa
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVTKKKKKKTHVECARFSPDGQYLV
TGSVDGFTEVWNFTTGKIRRDLKYQAQDNFMMMDDAVLCVCFSRDTEMLASGAQDGKIKV
WKIQGGQCLRRFERAHSEGVTCLNFSKDSSQILSVSFDQTIRIHGLKSGKTLKEFRGHSF
FNKATFTQDGHYICASSDGTVKIXNMKTTECSNTFKSLGSTAGTDITVNSVILLSKNPEH
FVVSKRSNTVVIMNMQGQIVRSFSSGKREGDDFVCYALSPRGEWIYCVGEDFVLYYFSIV
TGKLERTLTVHEKDVIGIAHQPHQNLIATYSEDGLLKPWKP
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgtcgatcgaaatcgagtcttcggatgtgatccgcctcatcatgcagtacctgaaggag
aacagtttacatcgggcattagccaccttacaggaggagactactgtgtctctgaatacc
gtggacagcattgagagttttgtggctgacattaatagtggccattgggatactgtttta
caggctatacagtctctgaaattgccagacaaaaccctcattgacctctatgaacaggtt
gttctggaattgatagagctccgtgagttgggtgctgccaggtcacttctgagacagact
gaccccatgatcatgttaaaacaaacgcagccagagcggtatattcatctggagaacctc
ttggccaggtcttattttgatcctcgtgaggcatatccagatggaagtagcaaagagaag
agaagagcagcaattgcccaggccttagctggggaagtcagtgtggtgcctccatctcgt
ctcatggcattgctgggacaggcactgaagtggcagcagcaccaagggttgcttcctcct
ggtatgaccatagatttgtttcgaggcaaagcagctgtcaaggatgtggaagaagaaaag
tttcctacacagctgagcaggcatattaagtttggtcagaaatcacatgtgacaaaaaaa
aaaaaaaaaaaaacacatgtggagtgtgctcgattttctccagatggtcagtatctagtc
actgggtctgttgatggattcactgaagtatggaactttactactggaaaaataaggagg
gatcttaagtaccaggcccaggataactttatgatgatggatgatgctgtcctctgcgtg
tgtttcagcagagatacagaaatgttagcatctggggctcaagatggaaaaatcaaggta
tggaagattcagggtggacagtgtttaaggagatttgaaagggcacacagtgaaggtgtc
acctgtctaaacttttctaaggatagcagtcagatccttagtgtctcttttgaccagaca
attagaattcatggtttaaaatctgggaaaaccctgaaggaatttcgtggccactccttt
tttaacaaagcaacatttacacaagatggacattatatttgcgcatcctctgatggcacc
gtaaagatctgaaatatgaagaccacagaatgttcaaatacctttaaatccctgggcagc
actgcagggacagacattactgtcaacagtgtgatcctgctttctaaaaatccagagcac
tttgtagtgagcaaaagatcaaacacggtggtcatcatgaacatgcaggggcagattgtc
agaagcttcagctctggtaaaagagaaggtgatgactttgtttgctatgccctctctccc
cgtggtgaatggatctactgtgtgggggaggactttgtgctctactatttcagcatagtc
actggcaaactggagagaactttgacagttcacgaaaaggatgtgattggtattgcgcat
cagcctcatcagaatctgattgctacctacagtgaagatggactcctaaagccctggaaa
ccctaa

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