Galeopterus variegatus (Sunda flying lemur): 103611014
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Entry
103611014 CDS
T08727
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr04151
PI3K-Akt signaling pathway
gvr04510
Focal adhesion
gvr04512
ECM-receptor interaction
gvr04611
Platelet activation
gvr04820
Cytoskeleton in muscle cells
gvr04926
Relaxin signaling pathway
gvr04933
AGE-RAGE signaling pathway in diabetic complications
gvr04974
Protein digestion and absorption
gvr05146
Amoebiasis
gvr05165
Human papillomavirus infection
gvr05205
Proteoglycans in cancer
gvr05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103611014 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103611014 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103611014 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103611014 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
103611014 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
103611014 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
103611014 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
103611014 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103611014 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
103611014 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
103611014 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103611014 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gvr00536
]
103611014 (COL1A1)
Glycosaminoglycan binding proteins [BR:
gvr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103611014 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
103611014
NCBI-ProteinID:
XP_008593281
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEDQVEGQDEDIPPVTCVQNGLRYHDRDVWKPEPCRI
CVCDNGKVLCDDVICDETKNCPGVEPPEGECCPVCPDSAVSPTDQETTGVEGPKGDTGPR
GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSAGGISVPGP
MGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGR
PGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQ
MGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGESGPQGA
RGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP
QGPSGPPGPKGNSGEPGAPGSKGDAGAKGEPGPTGVQGPPGPAGEEGKRGARGEPGPTGL
PGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGESGRPGEAGLPGAKGL
TGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV
PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGE
QGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGSNGAPGNDGAKGDAGAPGAPGS
QGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAAGD
KGESGPSGPPGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGP
PGPAGAAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGP
AGKEGGKGPRGETGPAGRPGEVGPPGPPGPSGEKGSPGADGPAGAPGTPGPQGIAGQRGV
VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSPGA
EGSPGRDGAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPSGPAGPIGP
VGARGPTGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGP
RGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSF
LPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCR
DLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNPKD
KRHVWFGESMTDGFQFEYGGEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQ
TGNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPII
DVAPLDVGAPDQEFGFDISPVCFL
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgaca
cacggccaagaggaagaccaagtcgagggccaagacgaagacattccaccagtcacctgc
gtacagaacggcctcaggtaccatgaccgagacgtatggaaacccgaaccctgccggatc
tgtgtctgcgacaacggcaaagtgttgtgcgacgacgtgatctgtgatgaaaccaagaac
tgtcccggcgtcgaaccccccgagggcgagtgctgtcctgtctgccccgacagcgcagtg
tcacctacggaccaagaaaccacaggagtcgagggacccaagggagacactggcccccga
ggcccaaggggacccgcaggcccccctggcagagatggcatccctggacaacctggactt
cccggaccccccggaccccctggacctcccggacctcctggcctcggaggaaactttgcc
ccccagttgtcttacggctatgatgagaaatcagctggaggaatttccgtgcctggtccc
atgggcccctctggtcctcgtggtctccccggcccccctggcgcacctggtccccaaggt
ttccaagggccccctggtgagcctggcgagcctggagcctcaggtcccatgggtccccgc
ggtcccgctggcccccctggcaagaacggagatgatggggaagctggaaaacctggtcgt
cctggtgagcgtgggcctcctgggcctcagggtgctcgcggattgcctggaacagctggc
ctccctggaatgaagggacacagaggtttcagtggtttggatggtgccaagggagatgct
ggtcctgctggtcccaagggtgagcctggtagccctggtgaaaatggagctcctggtcag
atgggtccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggt
gctcgtggaaatgacggtgctactggtgctgctggaccccctggtcccactggccccgct
ggtcctcctggcttccctggtgctgttggtgctaagggtgaatctggtccccaaggagcc
cgaggatctgaaggtccccagggtgtacgtggtgagcctggccctcctggccctgctggt
gctgctggccctgccggaaaccctggtgctgatggacaacctggtgctaaaggtgctaat
ggtgctcctggtattgctggtgctcctggcttccctggtgcccgaggcccctctggtcct
cagggccccagcggccctcctggtcccaagggtaacagcggtgaacctggtgctcccggc
agcaaaggagatgctggtgccaagggagagcccggccctactggtgttcaaggaccccct
ggccctgctggggaagaaggaaagcgtggagcccgaggtgaacctggacccactggcctg
cctggacctcctggcgagcgtggtggacctggtagccgtggtttccctggtgcagatggt
gttgctggtcccaagggtcccgctggtgaacgtggttctcctggccctgctggccccaaa
ggttctcctggtgaatctggtcgtcccggtgaagctggcctgcctggtgccaagggtctg
actggaagccctggcagtcctggtcctgacggcaaaactggcccccctggtcccgctggt
caagatggtcgccctggacccccaggcccccctggtgcccgtggtcaggctggagtgatg
ggattccctggtcctaaaggtgctgctggagagcccggcaaagctggagagcgcggtgtt
cctggaccccctggtgctgtcggtcccgctggcaaggatggagaagctggagctcaggga
ccccctggccctgctggtcccgctggtgagagaggcgaacaaggccccgctggctccccc
ggattccagggtctccctggccctgctggtcctcctggtgaagcaggcaaacctggcgaa
cagggtgttcctggagacctcggtgcccctggtccctctggagcaagaggcgagcgaggt
ttcccaggcgaacgtggcgtgcaaggtccccctggtcctgctggtccccgtgggtccaac
ggtgctcctggcaatgacggtgctaagggtgatgctggtgcccctggagcccccggtagc
cagggagcccctggccttcagggaatgcctggtgaacgtggtgcagctggtcttccagga
cccaagggtgacagaggtgatgctggtcccaaaggtgctgatggttctcctggcaaagat
ggtgttcgtggtctgacgggccccattggtcctcctggccctgctggtgctgctggtgac
aagggtgaatctggtcccagcggccctcctggtcccactggagctcgtggcgcccccgga
gaccgtggtgagcctggtccccctggccctgctggcttcgctggcccccctggtgctgat
ggccaacctggtgctaaaggcgagcctggtgatgctggtgcaaaaggcgacgctggtccc
cctggccctgctggagctgctggaccccccggccccattggtaacgttggtgctcctgga
cccaaaggtgctcgtggcagcgctggtccccctggtgctactggttttcctggtgctgct
ggccgagtcggtccccccggcccctctggaaatgccggaccccctggccctcctggccct
gctggcaaagaaggcggcaaaggtccccgtggtgagactggccccgctggacgtcctggt
gaagttggtccccctggcccccctggcccttctggcgagaaaggatcccctggtgctgat
ggacctgctggtgctcctggtactcccggacctcagggtattgctggacagcgtggtgtg
gtcggcctgcctggtcagcgaggagaaagaggcttccctggtcttcctggcccctctggt
gaacctggcaaacaaggtccttctggagcaagtggtgaacgtggtccccctggccccatg
ggcccccctggactggccggaccccctggtgaatctggacgtgagggatctcctggtgct
gaaggctcccctggacgagatggtgctgctggccccaagggtgaccgtggtgagactggc
cctgctggcccccctggtgctcctggcgctcctggtgcccctggccccgttggccctgct
ggcaaatccggcgatcgtggtgagactggtccttctggtcctgctggtcccatcggccct
gtcggtgcccgtggccctactggaccccaaggcccccgtggtgacaagggtgagacaggt
gaacagggcgacagaggcattaaaggtcaccgtggcttctctggtctccagggtccccct
ggccctcctggctctcctggtgaacaaggtccctctggagcctctggtcctgctggtccc
cgcggtccccctggctctgctggtgctcctggcaaagatggactcaatggcctcccaggc
cccatcgggccccctggtcctcgcggtcgcactggtgatgctggtcctgttggtcccccc
ggtcctcctggaccccctggtcctcctggtcctcccagtgctggtttcgacttcagcttc
ctgccccagccacctcaagagaaggctcacgatggcggccgttactaccgtgccgatgat
gccaatgtggtccgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccag
cagattgagaacatccggagccctgagggcagccgcaagaaccctgcccgcacctgccgc
gacctcaagatgtgccactctgactggaagagcggagagtactggattgaccccaaccaa
ggctgcaacctggatgccatcaaggtcttctgcaacatggagacaggtgagacctgcgtg
taccccactcagcccagcgtggcccagaagaactggtacatcagcaagaaccccaaggac
aagaggcatgtctggttcggcgagagcatgactgacggattccagttcgagtatggtggt
gagggctccgaccctgccgatgtggccatccagctgaccttcctgcgcctgatgtccacc
gaggcttcccagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcag
accgggaacctcaaaaaggccttgctcctccagggctccaatgagatcgagatcagggct
gaaggcaacagccgcttcacctacagcgtcaccgtggatggctgcacgagtcacactgga
gcctggggcaagacagtgatcgaatacaaaaccaccaagacctcccgcctgcccatcatc
gatgtggcccccttggacgttggcgccccagaccaggaattcggcttcgacattagccct
gtttgcttcctgtaa
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integrated database retrieval system
