Geobacillus sp. WCH70: GWCH70_1102
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Entry
GWCH70_1102 CDS
T00915
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gwc
Geobacillus sp. WCH70
Brite
KEGG Orthology (KO) [BR:
gwc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gwc03032
]
GWCH70_1102
03400 DNA repair and recombination proteins [BR:
gwc03400
]
GWCH70_1102
Enzymes [BR:
gwc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GWCH70_1102
DNA replication proteins [BR:
gwc03032
]
Prokaryotic type
DNA Topoisomerases
GWCH70_1102
DNA repair and recombination proteins [BR:
gwc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GWCH70_1102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Auto_anti-p27
Lar_restr_allev
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ACS23962
UniProt:
C5D8V5
LinkDB
All DBs
Position
1153254..1155329
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDINNGYEPKYITIRGK
GPIIKELKTAAKKAKKVFLAADPDREGEAIAWHLANMLDLDIHSDCRVVFNEITKDAVKE
SFQHPRPINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDREK
EIKQFQPEEYWTIQAEFVKGNETFTASFYGVDGQKLELKKEADVAAILQRINGNHFTVTS
VAKKERKRNPVPPFTTSSLQQEAARKLNFRTKKTMMIAQQLYEGIDLGSEGTVGLITYMR
TDSTRVSESARQEALSYIEATFGKEFVAQEKRKEKKNANAQDAHEAIRPTSAFREPEKVK
PYLTRDQFRLYKLIWERFIASQMAAALLDTMSIELENEGVIFRASGSKVKFPGFMKVYVE
GTDDQTDEQDRLLPDLQEGETVFSKDIEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRNYVVLENKRFVPTELGEIVLELMLEFFPEIIDVEFTAKMEKNLDEIEEGK
VEWVKVVDEFYQEFEKRLQTAEKEMKEVEIKDEPAGVDCEVCGSPMVYKMGRFGKFVACS
NFPECRNTKPIVKEIGVKCPKCREGNIVERSSKKKRIFYGCDRFPQCDFVSWDKPLARPC
PKCGGLLVEKKLKKGVQVQCTACDYEEAPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactatcttgtcatcgtggaatcgccagcgaaagcgaagacgatcgaacgatat
ttaggaaaaaaatataaagtaaaagcttcgatgggacatgttcgcgatctgccaaaaagc
caaatgggcgttgatataaataacggctatgagccaaagtatattacgattcgcggtaaa
gggccaatcattaaagaattaaaaacagcagcgaaaaaagcaaaaaaagtgtttcttgcc
gcggacccggaccgcgaaggggaagcgattgcttggcatttagccaatatgctcgacctt
gatattcattccgactgccgcgttgtatttaacgagattacgaaggatgcggttaaagag
tcatttcaacatccacgtccgatcaatatgaatcttgttgacgcgcagcaagcgcgccga
gtgttggaccggctggttggatacaacattagcccgcttctttggaaaaaggtgaagaaa
ggattgagcgcggggcgtgttcaatctgtagcgctgcgtttgatcatcgaccgcgaaaaa
gaaattaaacaatttcagccggaagagtattggacgattcaagccgaatttgtaaaagga
aatgaaacgtttactgcttctttttacggagtggatgggcaaaagcttgaattaaaaaag
gaagcagacgttgccgcgattttacaacgcataaacggcaaccactttacggtgacatcg
gtggcaaaaaaggagcggaaacgaaatccagtgccgccgtttacaacgtcttccttgcag
caagaagcagcgcgcaagcttaattttcgaacgaagaaaacgatgatgatcgcccagcag
ctatatgaaggaatcgatcttggcagtgaaggaacggtcggcttaattacctatatgcgt
acagactcgacaagagtatcagaaagcgcacggcaagaggcactatcttatatagaagcg
acgtttggaaaagaatttgtcgcacaagaaaagcgaaaagaaaagaaaaatgccaatgcg
caagatgcgcatgaagcgattcgtccgacatctgcatttcgcgagccggaaaaggtaaag
ccatatttaacccgcgatcaatttcggttgtataagttaatttgggaacgttttatcgca
agccaaatggcagccgcactgttagatacgatgagcattgaacttgaaaatgaaggggtg
atctttcgggcaagcggctcgaaagtaaaatttcctggttttatgaaagtatatgtagag
ggaacggatgaccaaacggatgaacaagatcgccttcttccggatttgcaggaaggggaa
actgttttcagcaaagatattgaaccaaagcagcattttactcagccgcctcctcgctat
acggaagcgcggcttgtgaaaacgctagaagagcttggcatcggccggccgtctacgtac
gcgccgacgcttgatacgattcaaaaacgaaactatgtcgtgctagaaaataaacgtttt
gttccaacagaacttggagaaatcgtgttagaactaatgttagagtttttcccagaaatc
attgacgtggagtttacagcgaaaatggagaaaaatttggatgaaatcgaggaaggaaaa
gtagaatgggtgaaagtggtcgacgaattttaccaggaatttgaaaagcggctgcaaacc
gcggaaaaggaaatgaaagaagtcgagattaaagacgagccggcgggagtcgactgcgaa
gtgtgcggaagcccaatggtatataaaatggggcgattcggcaaatttgtcgcctgctcc
aatttcccggaatgccgcaatacaaagccgatcgttaaggaaatcggggtaaaatgtccg
aaatgccgcgaaggaaatattgtggagcgcagcagtaagaaaaagcggattttttatggc
tgcgaccgttttccacaatgcgatttcgtctcgtgggataaaccgcttgcccgcccttgc
ccgaaatgcggcggcttgctagtggaaaagaaactgaaaaaaggcgtgcaagtgcaatgt
acggcatgtgattacgaagaagcaccacaatcttga
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