Geobacillus sp. WCH70: GWCH70_1150
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Entry
GWCH70_1150 CDS
T00915
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
gwc
Geobacillus sp. WCH70
Pathway
gwc03030
DNA replication
gwc03430
Mismatch repair
gwc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gwc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GWCH70_1150
03430 Mismatch repair
GWCH70_1150
03440 Homologous recombination
GWCH70_1150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gwc03032
]
GWCH70_1150
03400 DNA repair and recombination proteins [BR:
gwc03400
]
GWCH70_1150
Enzymes [BR:
gwc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GWCH70_1150
DNA replication proteins [BR:
gwc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GWCH70_1150
DNA repair and recombination proteins [BR:
gwc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GWCH70_1150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
DUF1409
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ACS24010
UniProt:
C5D9C4
LinkDB
All DBs
Position
1196673..1200980
Genome browser
AA seq
1435 aa
AA seq
DB search
MLTNEQKERFQVLLQQLELTSDEFVPYFSEAGIQKLVIEKEKKCWHFYFLLPKILPYQVY
QLFTQKLVHAFHHIANVKYTIQTIDSHFTESDVRDYWTLCLQELQEGVSPLLSLLHEQVP
TVKGNKLYVTARNDAEAMAVKRRFAKKIAEVYQSFGFPLLQLEIEVKQSEKDFEQFIAQK
QQEDAERALAALTEMTKETKSETAGNAPAGPLIIGYPIREEEEIRTLDSIVEEERRVVVQ
GYVFDAEINELKSGRTLLTLKITDYTNSILVKMFSRDKEDAALMADVKKGMWVKVRGSVQ
NDTFVRDLVLIANDINEIKAKERQDTAPEGEKRVELHLHTPMSQMDAVTSVTKLIEQAKK
WGHPAIAVTDHAVVQSFPEAYSAAKKYDMKVLYGVEANIVDDGVPIAYNEAHRLLSEDTY
VVFDVETTGLSAVYNTIIELAAVKVKDGEIIDRFTSFANPHHPLSITTIELTGITDDMLK
DAPDVEEVLRQFYDWMGDSILVAHNASFDIGFLNVGFTKLGLGKVTNPVIDTLELARFLY
PELKNHRLNTLCKKFDIELTQHHRAIYDAEATGYLLMRLLKDAQERGILYHDELNERSKE
EVSYQRSRPFHVTLLAQNDIGLKNLFKLVSLSHVKYFYRVPRIPRSVLQQHREGILVGSG
CDKGEVFDNMIQKAPEEVEEIAKFYDFLEVHPPEVYKPLIEMDYVKDENMIKEIIRKIVM
LGEKLNIPVVATGNVHYLNPEDKIYRKILIHSQGGANPLNRYELPDVYFRTTDEMLKCFS
FLGEEKAKEIVVMNTQKIADLIGEVKPIKDKLYTPRIEGAEEEIREMSYRRAKEIYGDPL
PEIVEQRLEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSFVATMTEITE
VNPLPPHYVCPNCKHSEFFNDGSVGSGFDLPDKNCPKCGTKYKKDGHDIPFETFLGFKGD
KVPDIDLNFSGEYQPRAHNYTKVLFGEDNVYRAGTIGTVADKTAYGFVKGYASDLNLQLR
SAEIDRLAAGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDTSSEWRTTHFDFHS
IHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSSTESLGVTPEQIMCN
VGTLGIPEFGTRFVRQMLEETKPKTFSELVQISGLSHGTDVWLGNAQELIQNGTCTLSEV
IGCRDDIMVYLIYRGLEPSLAFKIMESVRKGKGLTPEFEEEMRKHDVPEWYIESCKKIKY
MFPKAHAAAYVLMAVRIAYFKVHHPLLYYASYFTVRAEDFDLDAMIKGSAAIRKRIEEIN
AKGLNATAKEKSLLTVLEVALEMCERGFSFKNIDLYRSQATEFVIDGNSLIPPFNAIPGL
GTNVALNIVRAREEGEFLSKEDLQQRGKLSKTLIEYLESRGCLDSLPDHNQLSLF
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgaacgagcaaaaagagcgatttcaagtgttgttgcagcagcttgaattgacg
tctgacgaatttgttccgtatttctctgaggcaggcattcaaaagcttgtcattgaaaag
gagaaaaaatgttggcatttctattttttgctgccgaaaattttgccttatcaggtttat
caactgtttacacaaaagcttgttcatgcgttccatcatatcgcaaatgtgaaatataca
atacaaacgatcgattcccattttacggaatcggatgtgcgtgactattggacgctctgt
ttgcaagagttgcaagaaggggtctcgccgcttttatcgttgcttcatgagcaagttccg
actgtaaaaggaaataaactatatgttactgctcgcaatgatgcagaagcaatggcggtg
aagcgccgcttcgccaaaaaaatagctgaagtatatcaatcgtttggttttccgcttttg
cagctggaaatagaagtcaaacagtcagaaaaagattttgagcaatttatagcgcaaaaa
cagcaagaagatgcggaacgtgccttagcggcattaacggagatgacgaaagaaacgaaa
tcggaaacagcgggcaatgcgccggcagggccgcttattatcggttatccaattagagaa
gaagaggaaattcgcacgctagacagcatcgtcgaagaagaacgccgcgtcgttgtacaa
ggatatgtgtttgacgcggagatcaatgagttaaaaagcggacggacgttattaacacta
aaaattaccgattatacaaactcgattttagtaaaaatgttttcacgcgataaagaagat
gccgcactgatggcggatgtaaaaaaaggaatgtgggtaaaggtaagagggagtgtgcaa
aatgatacgttcgtccgtgaccttgtgttaatcgccaacgatataaacgaaataaaggcg
aaagaacgccaagataccgctccggaaggagaaaaacgggtggaacttcatttgcacacg
ccgatgagccaaatggatgcggttacttccgttacgaagctcattgaacaggcgaaaaaa
tggggccacccagcgatcgctgttacggaccatgctgttgtgcagtcatttccagaagcg
tacagtgccgcaaaaaaatacgatatgaaagtattgtacggcgtcgaagcaaacattgtc
gatgacggcgtgccgatcgcctataacgaagcgcaccgcttgctttccgaggacacgtac
gtcgtctttgacgtggaaacgaccggtctatcggcggtgtataatacgattattgaactt
gccgctgtgaaagtgaaggacggagaaattatcgaccgctttacttcatttgccaacccg
catcatccgttatcgattacaacgatcgagctgacaggcattaccgatgacatgttgaaa
gatgccccagatgtcgaagaagtgctgcgccagttttacgactggatgggcgatagcatc
cttgtcgcacataatgctagctttgacattggatttttaaatgtcggctttacgaaactc
ggtcttggtaaagtgacgaatccggttattgatacacttgaattagcgcggtttttatat
ccagaattgaaaaatcaccgtttaaacacgctatgtaaaaaatttgatatcgagctaacc
cagcatcaccgagcgatttacgatgcagaagcgactggatatttgcttatgcgcctatta
aaagacgcgcaagaacgaggaattttatatcatgacgaattaaatgaacgttcgaaggaa
gaagtgtcgtatcaacgatcccgtccgttccatgtgacattgcttgcgcaaaatgacatt
ggattaaaaaatttattcaaactcgtttctttatcacatgtgaaatatttttaccgggtc
ccgcgcattcctcgctcagtgcttcagcagcatcgtgaaggaattttagtcggttccggc
tgtgataaaggagaagtatttgacaatatgattcaaaaagcgccggaagaagtcgaagaa
atcgcgaaattttacgattttctcgaggtgcatccgccggaagtgtacaaaccgctgatt
gaaatggattacgtaaaagatgaaaatatgatcaaggaaattatccgcaagatcgtgatg
ctcggggaaaaattaaacattcctgtcgttgcaactggaaacgttcattatttaaatcca
gaagataaaatttaccgaaaaattttgattcactcccaaggcggagcaaatccgctcaac
cgttatgagctgccggatgtatattttcggacgacggacgaaatgctcaagtgcttctct
tttttaggagaagaaaaagcaaaagaaatcgtcgttatgaatacgcaaaaaatcgctgat
cttattggcgaggtaaagccgattaaagataagctgtatacgccgcgcattgaaggggcg
gaagaggaaattcgcgaaatgagttatcggcgcgccaaagaaatttacggtgatccgctg
ccggaaattgttgaacagcgcttggagaaagagttaaaaagcattatcggacacggcttt
gccgtcatttatttaatttcccataaactcgtaaaaaaatcgcttgatgacggctacctt
gtcggttcgcgcggatctgtcggctcctcttttgtcgcgacgatgacagaaattacagaa
gtaaatccgctgccgccgcactatgtttgtccgaattgcaagcactcggaatttttcaat
gacggttcggtcggttcaggatttgacttgccggataaaaattgtccaaaatgcggcaca
aaatataaaaaagatgggcatgatattccgtttgaaacgttccttggctttaaaggggat
aaagttccggatatcgacttgaacttctccggggaatatcagccgcgcgcccataactat
acgaaagtattgttcggagaagataacgtatatcgcgcaggaacgatcggtacggtggct
gataaaacggcttacggttttgtcaaagggtatgcgagcgatttgaatttgcagctgcgc
agtgcggaaatcgaccgtcttgccgcgggatgtaccggagtaaaacggacaaccgggcag
catccaggaggcattatcgtcgttccggattatatggatatttacgattttacgccaatt
caatatccagctgacgatacgagttccgaatggcgcacgacgcattttgatttccattcg
attcatgacaatcttctgaagctagatattcttgggcacgacgatccgacggtaattcgt
atgctccaagatttaagcggcattgatccaaaaacgattccgacggacgatccggaagtg
atgaaaattttcagcagtactgaatcacttggcgtcacgccggaacaaattatgtgcaat
gtcggcacgctcggtattccagaattcggaacgcgctttgtccggcagatgcttgaagaa
acgaagccaaagacattttccgagctggtgcaaatttccggcctttcccatggaacggac
gtctggcttggaaacgctcaagagttaattcaaaacggcacttgcaccctttctgaagta
attggctgccgcgacgacattatggtttatttaatttatcgcgggcttgagccgtcgctt
gcctttaaaattatggaatcggtgcggaaaggaaaagggctaacgccggaattcgaagaa
gaaatgcgcaaacatgatgtgccggaatggtatattgaatcatgtaaaaagattaaatat
atgtttccgaaagcgcacgctgccgcgtacgtattaatggcggttcgcattgcttacttt
aaagtgcatcatccgcttttgtactatgcttcttattttacagtgcgtgcggaagacttt
gatttggacgcgatgattaaaggttctgcggcgattcgcaaacgcatcgaagaaattaat
gcgaaaggattgaacgcgacggcaaaagaaaaaagcttgttgacggtattagaggtcgct
ttagaaatgtgtgaacgcggattctcgtttaaaaacatcgacctttaccgttcacaggcg
accgaattcgtcattgacggcaattcgcttattccgccatttaacgccattccgggtctt
gggacaaacgtggcgctcaacatcgtccgtgctcgcgaagaaggagaatttttatcaaaa
gaagatttacagcagcgcggaaaactttcaaagacgctcatcgaatatttagagagccgc
ggttgtcttgattcgttgccagaccataaccagctttccttattttaa
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