Geobacillus sp. WCH70: GWCH70_1171
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Entry
GWCH70_1171 CDS
T00915
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
gwc
Geobacillus sp. WCH70
Pathway
gwc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gwc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWCH70_1171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gwc03019
]
GWCH70_1171
Messenger RNA biogenesis [BR:
gwc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GWCH70_1171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Mur_ligase_C
Lactamase_B_6
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
ACS24031
UniProt:
C5D9E5
LinkDB
All DBs
Position
1220114..1221781
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AA seq
555 aa
AA seq
DB search
MKTKQVEKIRIFSLGGVGEIGKNMYVVELDDDIFVIDAGVMFPEDEMLGIDKVIPDISYL
IERQDRIKAIFLTHGHEEHIGAIAYVLKKITAVPVYGTKLTLGLAESILKEQGITNAKLI
EIRSDSEILFDKAKVTFFRTIHSIPDSVGISIHTSQGAIVYTSDFKFDQTPYGKNRADLG
KMAQIGEQGVLCLLSDSTNAERPGYTGSDTLVAQEIADVIYNANGRVFVACYASNITRIQ
QVLHAAKMYGRKVAVVGKTLHKVMDIAVRLGYLHLPEKVTISIHDIDRYDDKELIILTTG
GHGQPMSALARMAKQVHKQVNIKEGDTVIVAASVMPGYELVFSKTIDALYRAGANVIYRE
RKVHVSGHACQEELKLMLNLMKPKYFIPVHGEYRMQKAHANLAKAVGISEDRTFLIDKGD
VIEFRNGVARPGGKVPYGNILIDGLGIGDVGNIVLRDRRLLSQDGILIVVVTLSKESKKI
IAGPEIISRGFVYVRESESLLDEATKIVANIVNKCLQTYMIEWSSLKSNIREALSQFLFE
KTKRKPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacgaaacaagtagagaaaataaggattttttcccttgggggagtcggggaaatc
ggtaaaaacatgtatgtggtcgagctggatgacgacatttttgtgatcgacgccggcgtc
atgtttcctgaggacgagatgcttgggattgacaaagtgattcctgacattagctatctc
attgaacgccaagatcgcattaaagcaatttttttaacccacgggcatgaggaacatatt
ggagccattgcttacgtgttgaaaaagattacggcggtgccggtgtacggaacaaagctt
acgttaggattggcagaatcgattttgaaggaacaggggattacaaacgcaaaactaatc
gaaattcgctccgattcggaaattttgtttgataaagcaaaagtgacgtttttccgaacg
attcatagcatccctgattcggttgggattagcattcatacatcccaaggcgccattgtc
tatacgagcgactttaaatttgaccagactccatatggcaaaaatcgagccgatttaggg
aaaatggcgcagattggcgaacaaggagtgctttgcctattatccgatagtacgaatgcg
gaaagaccgggttatacgggatcggacacgcttgtagcccaggaaattgccgatgttatt
tataacgcgaatggtcgggtttttgttgcttgctatgcgtcgaacatcaccagaattcaa
caagtattacatgcagcaaaaatgtacggacggaaggtagcggttgtagggaaaacgttg
cataaagtgatggatattgctgttcggcttggatatttacatcttccggaaaaagtgact
atttccatccatgacattgaccgctatgatgacaaggaacttattattttaacaacaggc
gggcatggccaaccgatgagcgcattggcccgtatggctaaacaagtacacaagcaggtc
aacataaaagaaggagatactgtcattgttgcggcatcggtgatgcctggatatgaatta
gtattttcaaaaaccattgatgcactgtatcgtgccggagcgaacgtcatttaccgcgag
agaaaagtgcacgtgtctggacacgcatgccaagaagaattgaagctaatgcttaattta
atgaaaccgaaatattttattcctgttcatggcgaatatcgtatgcaaaaagcacacgct
aatcttgcaaaagcggttggcatctccgaagataggacgtttttgattgacaaaggtgat
gtcattgaatttcgcaatggagtagcgcgtcctggaggaaaagttccgtacggcaacatt
ttgattgatggtcttggcataggcgatgttggcaacattgttttaagagaccggcgtctt
ctttcgcaagatgggattttaattgttgtcgttacattgagcaaagagtcaaaaaaaatt
atcgctggaccggaaattatttcgcgtggttttgtctatgtcagagaatcagaatcattg
cttgatgaagcaacaaaaatcgttgcaaatattgtgaataaatgcttgcaaacctatatg
atcgaatggtcgtcattaaaatcaaacattcgcgaagcattgagccaatttttatttgaa
aaaacaaaacgaaaaccgatgattttaccaattattatggaagtataa
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