Geobacillus sp. WCH70: GWCH70_2031
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Entry
GWCH70_2031 CDS
T00915
Name
(GenBank) putative RNA polymerase, sigma 70 family subunit
KO
K03086
RNA polymerase primary sigma factor
Organism
gwc
Geobacillus sp. WCH70
Pathway
gwc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gwc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GWCH70_2031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gwc03021
]
GWCH70_2031
Transcription machinery [BR:
gwc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWCH70_2031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Tropomodulin
DHDPS
Motif
Other DBs
NCBI-ProteinID:
ACS24757
UniProt:
C5D2W5
LinkDB
All DBs
Position
2089690..2092185
Genome browser
AA seq
831 aa
AA seq
DB search
MKNGPIYSNISIINRAFRALGSPLHRDLIIDFVRTHWGNGRGLPLEEAQNLVKLALEAQF
YYEKASEEDHFSRKEVYCKELDRLYYNMQINPYPYQYNSRIMNLTMSEIYLDPRFDTISS
DDGIIYLVLSEWNLLNDLVYYYMVKNNIDKIPISDIYRNVLSKYSIDDPNAYFFPKIDPR
FQVNRKQIVSLVEKNYSEAFLSVQVTDYIKEKVAMKIPIIKQFVMDSKEAVKIRYIIKRI
FNLQPHQPLFFPYFEAIKQIVPLLQNNLFLVNDDSLIYSASKELPKIIPNQRLYGSTNLD
IIDLKVNELDYNINNQTTSLKQKDQTSHETTPPTKRQKLSYTLRYYDRIQETLAAHYFKD
WIQNGYLKVNFLDGEKITPMIIHYDEKNNVLYGEHLSNFMIDYDLEPGQKLEFFLKDDHL
YLELGVFDEKAHTEQMKYEDLAKLSEMKKLGTKSLMQHLAELLMLHPSGLHIREIVRDIQ
EDTTYAESSIRNTLSSYPFFEPIKGKVGYWRFNPKLWKKQYMELENNIKNNLKSKSIPTL
RQQWKIKALASTKTKRRLTNEQFKQLPKETFLSLAWDYYSFTIYQYAKKFSCETVPMEDL
YQEAYFALHKAYEKYNPELGGSFYHYFRRHLFARLQRYKSDNLSLIRIPTHRIETLMKND
QIFEKQLITNEKTNINLLDSDYILFKTNYISFEELYSLYDDNAGDEARARIYCYFNHPFY
EDTSLKRQVFIDYSYIEEPEECDWLLSEERYEEEIENRVLAESAIDYLRNIIKNPRDWKI
ILYRFGFMTGEEMTLQEIGELFGVSRERIRQIENKALKHLKKCPALKGANP
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatggtcctatttacagcaatatatccataattaatagagcattccgtgcgctt
ggatctccccttcaccgtgaccttattattgattttgttcgtacacattggggaaatgga
agaggacttccgcttgaagaagctcaaaatcttgtaaaacttgctcttgaagctcaattt
tattatgaaaaagcaagtgaagaagatcatttttcacgtaaagaagtttattgcaaagag
ctagaccgtctctattataatatgcaaattaacccttatccatatcaatataatagtaga
ataatgaatttaacaatgagtgaaatctatttagatccccgatttgatacaatttcatct
gatgacggaattatatacttagttctgagcgaatggaatttgctgaatgatttagtctac
tattatatggtaaaaaacaatattgacaaaatcccaatttccgatatatacagaaatgtt
ttatctaaatattcaatcgatgatcctaatgcatacttttttccaaaaattgatcctcgt
tttcaagttaatcgcaaacaaatcgtttctctagttgaaaaaaactatagcgaggcattt
ctttctgttcaagtaaccgactatattaaagaaaaagttgcgatgaaaattcctatcatt
aaacaatttgtaatggatagtaaggaagctgttaaaatacggtatatcattaaacgaata
tttaacttgcaaccacatcaaccgttgttttttccgtatttcgaagcaattaaacaaata
gttccactattgcaaaacaatctttttttagtaaatgacgattctctcatatattcagca
tccaaagaattaccgaaaatcataccaaatcagcgcttatatggaagcactaatttggat
atcattgatttaaaggttaatgaactagactataacataaataaccagactacttcgcta
aaacaaaaggatcaaacatctcatgaaacaacgccgccaacgaaaagacaaaagttgagc
tatacccttcgctattatgatcgaattcaagaaactttagctgcacattatttcaaagat
tggattcaaaatggttatttaaaagtaaatttcttagatggtgaaaaaataacacctatg
attattcattatgatgaaaagaacaatgtgttatatggtgaacatcttagtaattttatg
atcgattacgatttagagcctggacaaaagctagaattttttctaaaagacgatcattta
tacttggaattaggtgtatttgatgaaaaagcacatacagagcaaatgaaatatgaagac
ttagctaagctatcagaaatgaaaaagctaggcaccaaatcactaatgcaacatttagct
gaacttctaatgctgcatccatcaggattacatattcgcgaaatcgtacgcgacattcaa
gaagatactacatacgcagagagcagtattcgaaatactttatcttcctatccatttttt
gagcctattaaaggaaaggtggggtattggcggttcaaccctaaactgtggaaaaaacaa
tatatggaattagaaaataatataaaaaataacctcaaatcaaaatcaatacctactctt
agacaacaatggaaaataaaagcgttagcatccactaaaacaaagcgacgcttgaccaac
gaacaatttaaacaattgccgaaagaaacttttctttctttagcatgggactattattca
tttacaatttaccaatatgcaaaaaaattttcatgtgaaacagttccaatggaggatctt
tatcaagaagcctatttcgcattacataaggcatacgaaaaatacaatcccgaattgggc
ggtagtttttatcattattttcgcagacatttatttgctcgtttacaacgctataaatca
gacaatttgtccttgattcgtattcctactcatcggattgaaacacttatgaaaaatgat
caaatcttcgaaaaacaactaataacaaatgagaaaactaatattaacctcttggatagc
gactatatacttttcaaaacaaattatatcagttttgaagaactatattctttatatgat
gacaatgctggagatgaggcacgtgcacgcatatattgttattttaaccatcctttttat
gaagacaccagcttaaaaaggcaggtttttattgattattcttatattgaagaacctgag
gaatgcgactggcttttatcagaagagcgttatgaggaagaaatagaaaaccgcgtattg
gctgagagcgctattgattatttacgtaatatcataaaaaacccgagagattggaaaata
attttgtatcgttttggctttatgacaggtgaagaaatgacattgcaagaaatcggggaa
ttattcggtgtttcccgtgaacgtatacgtcaaattgaaaacaaagccctcaaacattta
aaaaaatgtccagcattaaaaggagcaaacccataa
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