Geobacillus sp. WCH70: GWCH70_2406
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Entry
GWCH70_2406 CDS
T00915
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gwc
Geobacillus sp. WCH70
Pathway
gwc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gwc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GWCH70_2406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gwc03400
]
GWCH70_2406
Enzymes [BR:
gwc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GWCH70_2406
DNA repair and recombination proteins [BR:
gwc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GWCH70_2406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACS25102
UniProt:
C5D4R0
LinkDB
All DBs
Position
complement(2441877..2442773)
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AA seq
298 aa
AA seq
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MLKIGSHVSMSGKKMLLAASEEAVSYGANTFMIYTGAPQNTRRKKIEELNIEAGLAHMKE
HGIEEIVVHAPYIINIGNTKNPDTFALGVEFLRSEIERTEAIGAKQIVLHPGAHVGAGPE
AGIRKIIEGLNEVLTREQTVQIALETMAGKGSECGRSFEELAQIIDGVTHNEKLSVCFDT
CHTHDAGYNIVDDFDGVLEEFDRIIGLDRLKVLHINDSKNPRGSRKDRHENIGFGHIGFA
ALNYIVHHPQLADIPKILETPYVGEDKNNKKPPYKHEIAMLRAQVFDEELLTKIMNDE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaattggatcacatgtgtcaatgagcggaaaaaagatgctgcttgcagcaagt
gaggaagctgtttcctacggagcaaatacgtttatgatttacacgggggctccgcaaaat
acacggcgtaaaaaaattgaggagctgaatattgaagcagggcttgcccatatgaaagag
catggcattgaagaaattgttgtacacgctccatatatcattaatatcggcaacacaaaa
aatccggacacgtttgctctcggtgtagaatttttgcgatctgaaatcgaacggaccgag
gcgattggcgcaaaacaaattgttcttcatcctggagcgcatgttggggcaggcccggaa
gcaggaatccgcaaaattattgaggggttaaatgaagtattaacgcgtgaacaaacggtg
caaatcgcgttagaaacaatggcgggaaaaggttcggaatgcggccgcagctttgaggaa
ctcgcccaaattattgatggtgtcacccataacgaaaaattgtcggtttgctttgatacg
tgccatacgcatgatgccggctataacatcgtcgatgattttgatggggtattggaagaa
ttcgatcgaattatcgggttagaccggcttaaagtgctccatattaacgatagcaaaaat
ccgcgcggaagccggaaagaccgccacgaaaacatcggttttggacatatcggttttgcc
gcattaaactatatcgttcaccatccacagcttgccgacattccgaaaattttagaaaca
ccgtatgtcggagaggataaaaacaataaaaaaccgccatataagcacgaaattgccatg
ttgcgcgcgcaagtattcgatgaagagttgttgacaaaaattatgaatgatgaataa
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