Geobacillus sp. WCH70: GWCH70_2407
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Entry
GWCH70_2407 CDS
T00915
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
gwc
Geobacillus sp. WCH70
Brite
KEGG Orthology (KO) [BR:
gwc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gwc03019
]
GWCH70_2407
03009 Ribosome biogenesis [BR:
gwc03009
]
GWCH70_2407
Enzymes [BR:
gwc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GWCH70_2407
Messenger RNA biogenesis [BR:
gwc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GWCH70_2407
Ribosome biogenesis [BR:
gwc03009
]
Prokaryotic type
rRNA helicases
GWCH70_2407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DUF7117
Motif
Other DBs
NCBI-ProteinID:
ACS25103
UniProt:
C5D4R1
LinkDB
All DBs
Position
complement(2442802..2444109)
Genome browser
AA seq
435 aa
AA seq
DB search
MKETLFERFSFQPFIIEAIKELRFYKPTEIQERIIPSILRGESVIGQSQTGTGKTHAYLL
PIIEKIDPDHEAVQAVITAPTRELATQIYHEILKIIKFCPSDRQITARCFIGGTDKQKAI
EKLKTQPHIVVGTPGRINDLIREQALNVWTATTLVVDEADLMLDMGFIVDVDQIAARMPK
ELQMLVFSATIPEKLKPFLKKYMENPKYVHVAPKQVTAEKIEHVLVPLRSRDKAKLLHEM
LVAYNPYLAIVFTNTKKMADEVADRLIEKGMKVGILHGDLTPRERKKMMRQIRDLEFQYI
VATDLAARGIDIEGVSHVINYELPKDLQFYIHRVGRTARAGYTGIATTIYEPSDQDAITK
LEKMGIEFLHRDLIRGEWVDLPPWNRRSKRAKQDGEIEQLLAKMKKSKQIKPGYKKKLLA
EIEKQKKRLRRLKKQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaacgttatttgagagattttcatttcagccatttattattgaagcgattaag
gagcttcgtttttataaaccaacagaaattcaggagcgcatcattccgagcattcttcgc
ggcgaaagtgtgattggtcagtcgcaaacaggaacaggaaagactcacgcctatttattg
ccgatcattgaaaaaattgacccggatcacgaggcggtacaagcggttattaccgcaccg
acgcgggagcttgcaacgcaaatttaccatgaaattttaaaaattataaaattttgtccg
agtgatagacaaattacggcacgttgctttattggaggaacagataagcaaaaagcgatc
gaaaaattgaaaacacagccccatatcgtagttggaactccaggaagaattaacgacctc
attcgcgaacaagcactgaatgtttggacagcaactacacttgtcgttgacgaagcagac
ttaatgttagatatgggatttattgtcgatgtcgatcaaattgcagcacgcatgccaaaa
gaactgcaaatgctcgtcttttctgcgacaatcccggaaaagttaaaaccatttttgaaa
aaatatatggaaaatccaaaatatgttcatgttgcaccaaagcaagtcacagcggaaaaa
attgagcacgttcttgtgccgcttcgcagccgtgataaagcgaagctgctgcacgaaatg
ttagttgcgtataatccgtatttagcaattgtatttaccaatacaaaaaaaatggcggat
gaagtggcagataggctgatcgaaaaagggatgaaagtcgggattttacacggtgatcta
actccgcgcgaacgtaaaaaaatgatgaggcaaattcgcgatttggagtttcaatatatt
gttgctaccgatctagctgcccgcggcattgatattgaaggagtaagccatgtcattaac
tacgaactgccaaaagatttacagttttacattcatcgtgtcggccgcactgcgcgcgct
ggttacacaggaattgcgacgacgatttatgaaccatcggatcaagatgcaataaccaaa
ttagaaaaaatgggaattgagtttcttcatcgcgatcttatccgtggagaatgggtagat
ttgccgccttggaatcggcgaagcaagcgggccaagcaagatggggaaatagagcagctt
cttgcgaaaatgaaaaaatcgaaacaaatcaagccaggttataagaaaaagttgcttgcc
gaaatagaaaaacaaaaaaagcggttgcggcgtttaaagaaacaataa
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