Geobacillus sp. WCH70: GWCH70_2512
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Entry
GWCH70_2512 CDS
T00915
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gwc
Geobacillus sp. WCH70
Pathway
gwc03410
Base excision repair
gwc03430
Mismatch repair
gwc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gwc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GWCH70_2512
03430 Mismatch repair
GWCH70_2512
03440 Homologous recombination
GWCH70_2512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gwc03400
]
GWCH70_2512
DNA repair and recombination proteins [BR:
gwc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GWCH70_2512
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GWCH70_2512
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GWCH70_2512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
TetR_C_32
OmpH
DUF2681
Motif
Other DBs
NCBI-ProteinID:
ACS25207
UniProt:
C5D515
LinkDB
All DBs
Position
complement(2540678..2543035)
Genome browser
AA seq
785 aa
AA seq
DB search
MLIAKTRWDVKRPDENIVTHLVEQSHMDPLIAKLLVHRGVRTVEEANAFLYPLKQPFHDP
FLLDGMERAIERIQRAIQHGEHILVYGDYDADGVSSTTVMVSALKEAGAIVDFYIPNRFT
EGYGPNENAFRWAKEQGFSLIITVDNGIAAVKEVALANELGMDVIITDHHEVGPALPEAY
EIIHPKKPGSTYPFRELAGVGVAFKVAHALLGDVPRHFLDVVAIGTIADLVSLTGENRLL
VAQGLEQLRNTKRIGLRALCKQCGIEAKEINEQTVGFVIAPRMNAVGRLGEATPAVRLLM
TEKEEEAQRLAKEMDDLNRERQQLVAKIAEEAAQIVNEQFPPSENKVLVIAKEGWNPGVI
GIVASRLVEQFYRPTIVLSIDSEKGIAKGSARSIHGFDMFSSLSTCRDILPHFGGHPMAA
GMTLSVDHIDELRQRLNALADDMLTADDFTPITPIDAVCSVSDLTLSVAEQLEKFAPFGV
DNAKPLFLMENVSVETIRRIGADQSHLKAVFAQNGAAIDSVGFGFGYLCDEIAPDAKVSV
VGELMVNEWNNLRKPQLMICDVAVHECQLYDIRGMRDVRPLIASLPKDKRMLIMFREGTA
DALGLEAYKEEIYYTASVEEASRLCLDNRYVVLLDMPTSLEIIKMLLRSSLPARIYALFY
QRETHFFRTLPTRDHFKWFYAFLRKKGVFNLAKYGGELARARGWTEETVRFMAKVFLELE
FITQQDGVVSLVPQPAKRDLSESPTYRFKQAQFELENLFLYSTYEQLKRCLFEMKGSQTY
EEANV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgttaatagcaaaaacacgttgggatgtgaaacgtcctgacgaaaatatcgtaacgcat
ttagtagaacagtcgcatatggatccgttgattgcgaagcttcttgttcatcgtggagtt
cgtacggtagaagaggcgaacgcgtttttatatccgctgaaacaaccgtttcatgatccg
tttttgctagatgggatggaacgggcaattgagcggattcaacgggcgatacaacatgga
gagcatattttggtatatggtgattatgatgctgacggcgtaagcagcacgacggtaatg
gttagtgctctgaaggaagctggcgccattgtggatttttacattcccaatcgatttacc
gaaggatacggtccgaatgagaatgcatttcgttgggcaaaggagcaaggattttctctg
attatcacggtcgataacggcattgctgcagtgaaggaagtggcgcttgccaatgagctt
ggtatggatgtcattattacagatcatcatgaagtgggaccggcgttgccggaagcatat
gaaattattcatccgaaaaagcccggcagtacatacccgtttcgtgaattagctggcgtc
ggagtagcatttaaagttgcccacgcattgcttggggatgtgccgcgtcattttttagat
gtcgtagcaattggaacgatcgctgatctcgtttcccttaccggagaaaatcgtctgttg
gttgcacaagggcttgaacagttgcgaaatacgaaacgtattggattgcgtgcattgtgt
aaacaatgtggaatagaagcaaaagaaattaacgaacagacggttgggtttgttattgcg
ccgcggatgaatgcagttggccggttgggagaagcaacccctgctgtcagattgttaatg
acggagaaagaagaggaagcacaaagacttgcgaaagaaatggatgatttaaatcgggag
cggcagcagcttgtcgcgaaaatagcggaggaagcggcacaaatagtaaatgaacaattt
ccgccatccgaaaataaagtgcttgtgatcgcaaaagaaggatggaatccaggggtcatt
ggcattgttgcttcccgattggttgaacaattttaccgtccgacgattgttttgagcatt
gattccgagaaaggaattgcaaaaggttcggcgcgaagcattcatgggtttgatatgttt
tcaagcttatcgacatgtcgcgatattttgccacattttggcgggcatccaatggcggcg
ggaatgacattatcggttgatcatattgatgaattgcgtcagcgtctcaacgcacttgcc
gatgatatgttgacagccgatgattttaccccaattacaccgattgatgcagtttgttcc
gtatctgatttaacgctttcggtagccgaacagcttgaaaagtttgctccgtttggtgta
gataacgcaaagcctctttttttaatggaaaatgtatcagtggaaacgatccgacgcatc
ggggctgaccagtcgcatttaaaggctgttttcgcccaaaatggcgctgcgattgatagc
gtcgggttcggctttggttatttgtgcgatgaaatcgctccagatgcgaaagtgtccgtg
gttggcgagttaatggtgaatgagtggaacaatcttcgcaaaccgcagctaatgatttgc
gatgttgcggtgcatgaatgtcaattgtatgatattcgcggtatgcgcgatgtacggcca
ctgattgcgtctcttccgaaagataagcggatgttgattatgtttcgggaaggtacggca
gatgcattaggacttgaagcatataaagaagagatttactacacggcctcagtggaagaa
gcgtcgcggctttgtttagataaccggtacgttgtgctgttagatatgccaacgtctttg
gaaatcataaaaatgttgttacgttctagtttacctgcgcgcatttatgcgttattctat
caaagggagactcatttttttcgcacgttgccaacgcgtgatcattttaaatggttttat
gcgtttttgagaaaaaaaggtgtgtttaacttggctaagtatggtggcgagttagcacgt
gcgcgtggatggacagaagaaactgtccggtttatggcaaaagtatttctcgagctggaa
tttattacgcaacaggatggagttgtatcgcttgttcctcaaccggctaaacgcgattta
agcgaatcgccgacttatcgctttaaacaagctcagtttgagcttgaaaatctatttttg
tattcaacatatgaacaattaaagcgttgtcttttcgaaatgaaaggttcgcaaacatac
gaggaggcaaatgtgtaa
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