Geobacillus sp. WCH70: GWCH70_2754
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Entry
GWCH70_2754 CDS
T00915
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
gwc
Geobacillus sp. WCH70
Brite
KEGG Orthology (KO) [BR:
gwc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gwc03016
]
GWCH70_2754
Enzymes [BR:
gwc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GWCH70_2754
Transfer RNA biogenesis [BR:
gwc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GWCH70_2754
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ACS25443
UniProt:
C5D6C7
LinkDB
All DBs
Position
complement(2790179..2790733)
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AA seq
184 aa
AA seq
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MKKTHYFIAIPIASEVKKQISQWRDGIVSHFPFRSWVHEEDYHITLAFLGYVPPAKLDAI
CKTMTQVAKRHAPFSLSLSEIHTFGNRTAPRILWQGVEKEEKLFALQRDVYTACIDIGFS
LDKRPFTPHITIARKWQGNEEFRLDALKQKSRVTATFSVHEIVLYQTHLERTPKYEARAL
FPLF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacgcattattttatcgctatccctatcgctagcgaagtaaaaaaacagatt
tcacaatggagagatggaatcgtttcccattttccatttcgttcatgggtgcatgaagaa
gattaccatattacattagcatttttaggatacgttccacccgcaaaattggacgcgata
tgcaaaacaatgacgcaagtggcaaagcgccacgctccattctcattatccttatcagaa
atacatacatttggaaatcgaacagcgccgcgaattttatggcaaggggtggaaaaagaa
gaaaaactatttgccctgcaacgcgatgtgtataccgcctgtatcgatatcggattttct
ttagacaaacggccgtttaccccgcatattacgattgctcgcaaatggcaaggaaatgaa
gagtttcgcttagatgcgcttaagcagaaatcaagagtaacggcgaccttttccgttcat
gaaatagtgttatatcaaacccatttagagcgaacaccaaaatatgaagcgcgcgctttg
ttcccgcttttctaa
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