Geobacillus sp. WCH70: GWCH70_2992
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Entry
GWCH70_2992 CDS
T00915
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
gwc
Geobacillus sp. WCH70
Pathway
gwc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gwc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GWCH70_2992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gwc03400
]
GWCH70_2992
DNA repair and recombination proteins [BR:
gwc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GWCH70_2992
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GWCH70_2992
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_19
AAA_22
TrwB_AAD_bind
UFL1
AAA_7
AAA_30
AAA
AAA_16
UB2H
Cas3-like_C_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACS25665
UniProt:
C5D7Q5
LinkDB
All DBs
Position
complement(3012569..3014548)
Genome browser
AA seq
659 aa
AA seq
DB search
MGDRFELVSAYKPQGDQPKAIAKLVEGIRKGVKHQTLLGATGTGKTFTISNVIKEVNKPT
LVIAHNKTLAGQLYSELKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTYIEKDASINDEID
KLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQ
YERNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIDRIREVDALTGEIIAEREH
VAIFPASHFVTREEKMRLAIENIEKELEERLRELREQGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLALRPPGSTPYTLLDYFPDDFLIIIDESHVTLPQIRGMYNGDRARKQV
LVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYELEHSPEVVEQIIRPTGLLDP
TIDVRPIEGQIDDLIGEIHERIKRNERTLVTTLTKKMAEDLTDYLKEVGIKVAYLHSEIK
TLERIEIIRDLRMGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADTITKSMEIAINETKRRRAIQEAYNKKHGIVPQTVKKEIRDVIRATY
AAEEKETYDTKPSYGKMAKKEREKLIADLEKEMKEAAKALDFERAAQLRDIIFELKAEG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgggggaccgttttgagttagtgtcggcgtataagccgcaaggagatcaaccaaaagcg
attgccaaattggtcgaaggaattcgaaaaggagtaaagcatcaaacgctgttaggggca
acaggaacgggaaagacgtttacgatttccaacgtcattaaagaggtgaacaaaccgacg
cttgtgattgcccataataaaacgttagcggggcagttgtacagcgagttaaaagagttt
tttccaaacaacgcggttgaatattttgtcagctattacgattattatcagccggaggcg
tatgtgccgcagaccgatacgtatattgaaaaagatgcaagcattaacgatgaaattgat
aagttacggcactcggcaacatcagcgctatttgagcggcgcgatgtgattattgtcgcc
agtgtatcgtgcatttacggattaggatcaccggaagaatatcgcgaactggttgtgtcg
ttgcgcgtcgggatggaaatcgagcgcaacgctttattgcgccgccttgtcgatatccaa
tatgaacggaacgacattgattttcagcgcggaacgttccgtgttcgcggagatgtcgtc
gagatttttcctgcttctcgggacgagcattgtattcgcgttgaattttttggcgatgaa
attgaccgcattcgcgaagtcgacgcattgacgggggaaattatcgcagaacgcgagcat
gtcgcgattttcccggcatcccacttcgttacgcgtgaagaaaaaatgcgtttagcgatc
gaaaatattgaaaaagaattagaagagcggctgcgcgaattgcgggaacaaggaaaactg
ttagaagcgcagcggcttgagcaacggactcgttacgatttagagatgatgagagaaatg
ggcttttgctcagggattgaaaactactcccggcatttagcgttgcgtccgccaggctcg
acgccgtacacgctgcttgattattttccagatgattttttgattatcatcgatgagtca
cacgtgacattgccgcaaattcgcggcatgtataacggagaccgggcgcgcaagcaagtg
cttgtcgatcatggcttccgtctgccatctgccctcgataaccgcccgttaacgtttgag
gagtttgaacaaaaaattaaccaaattatttatgtttccgcgacacctggtccgtacgag
ctggaacatagcccggaagttgtggaacaaattattcgtccgacagggctgttggatcca
acgattgacgttcgtccgattgaagggcaaatcgatgatttaatcggagaaattcatgag
cggatcaagcggaatgaacgcactctcgttacgacgttaacgaagaaaatggcggaagat
ttaacggattacttaaaagaagtcggcattaaagttgcgtatttacattccgaaattaaa
acgctcgagcgcattgaaattattcgcgatttgcgcatgggcaaatacgatgtgctcgtc
gggattaacttgttgcgggaaggattggatattccggaagtgtcgcttgtcgccattctc
gatgcggataaagaaggctttttgcgctcggaacgttcgcttattcaaacgattgggcgt
gcggcgcgaaacgccaacggccatgtcattatgtacgccgatacgattacaaaatcgatg
gaaattgccatcaacgaaacgaaacggcgccgtgcgattcaagaagcgtataacaaaaag
cacggcatcgttccgcagacggtgaagaaagaaattcgcgatgtcatccgtgcgacttac
gcggcggaagagaaagaaacgtacgatacgaaaccatcttacggcaagatggcaaagaaa
gaacgagaaaagctcattgccgatttagaaaaagaaatgaaagaagcagcaaaagcgctt
gatttcgagcgcgctgcccaattgcgtgatattatttttgagttaaaagcggaaggatga
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