Komagataeibacter xylinus: H845_2031
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Entry
H845_2031 CDS
T03044
Name
(GenBank) RNA-metabolising metallo-beta-lactamase protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
gxl
Komagataeibacter xylinus
Pathway
gxl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gxl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H845_2031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gxl03019
]
H845_2031
Messenger RNA biogenesis [BR:
gxl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H845_2031
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
RNase_J_C
Motif
Other DBs
NCBI-ProteinID:
AHI25965
LinkDB
All DBs
Position
complement(2185415..2187058)
Genome browser
AA seq
547 aa
AA seq
DB search
MNDMTGVSFLPLGGTGEIGMNLNLYRQGEAWLAVDCGIGFSGNDTPEAEIILPDPVFIAE
RRDRLAGLVVTHAHEDHLGAIAHLWPQLGCPVYVTPFAAAVLRRKLGEAGLVQQVPIHVI
APGGAFTVGPFDLRFVSVTHSVPESQSLVLRTPQGIIVHTGDWKIDPDPQVGPPTDLETF
AELGREGVLAMVCDSTNVRTEGPSASEADVRREMTRLIASLEGRIAVTCFASNVARVETL
AMAAKAAGRRVAVVGRSLRNLEVAARECGYLSDVPHFLSEQDANSIPDNQILLIVTGSQG
EPRSALSRIAADTHPNIALGEGDTVIYSSRMIPGNEQAVIQVQDSLTRRGVHVITDKDHL
VHVSGHATGGDVRKLYDLVRPRFLIPVHGEWRHLTANAAIAQELNIEPVLLEDGDILDIR
ADGVEIGDTAPTGRLVLDGGRILPMNGGVLSARRRMLFNGMVLGSFAVDDEGYLIGDPKV
SAPGLLDAEDPETQRVTEEFGNALDEIPDELRENDATFREAAKTALRRALGRKLQKRPLV
DVHLLRV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatatgacaggcgtttcattccttccgttaggcgggacaggcgaaatcggcatg
aacctcaacctgtaccggcagggtgaggcgtggctggcggtggattgcggcatcggcttc
agcggcaatgacacgccggaggcggaaatcatcctgcccgatccggttttcattgccgaa
cgccgggacaggctggccggcctggtcgtcacccacgcgcatgaagaccatctgggcgcg
atcgcccatctgtggccacagcttggctgcccggtctatgtcacgccgtttgccgcagcc
gtgctgcgccgcaagctgggggaggccgggcttgtgcagcaggtgcccattcatgtgatc
gcccccggcggcgcctttacggtcgggccgtttgacctgcgcttcgtctcggtcacgcat
tcggtgccggaatcgcagtcgctggtgctgcgcacgccgcagggcatcattgtccatacc
ggcgactggaagatcgaccccgacccgcaggtggggccgccgaccgaccttgaaaccttc
gccgaactggggcgcgagggcgtgctggccatggtgtgcgacagcactaatgtccgcaca
gaaggcccgtccgcatccgaagccgacgtgcggcgcgagatgacgcgcctcatcgcctcg
cttgaggggcggatcgcggtcacctgcttcgccagcaatgtcgcccgcgtggaaacgctg
gccatggcggcaaaggccgcgggccgccgcgtggccgtggtcgggcgcagcctgcgcaac
ctggaggtcgcggcgcgtgaatgtggctacctgtcggatgtgccgcatttcctgtcggaa
caggacgccaattccatccccgacaaccagatcctgctgatcgtgaccggcagccagggc
gagccgcgctcggccctgtcgcgcatcgcggccgacacccaccccaacatcgcgctgggg
gaaggcgatacggtcatctacagcagccgcatgattcccggtaacgaacaggccgtgatc
caggtgcaggacagcctgacccggcgcggcgtgcatgtgattaccgacaaggaccacctt
gtgcatgtatcgggccacgccacgggcggcgacgtgcgcaagctgtatgaccttgtgcgc
ccgcgtttcctgatcccggtgcatggcgaatggcgtcacctgaccgccaatgccgccatt
gcgcaggaactcaatatcgaacccgtgctgctggaagatggcgatatcctcgacatccgt
gccgacggggtcgaaattggcgataccgcgcccaccgggcggctggtgctggatggcggg
cgtatcctgcccatgaatggcggcgtgctgtcggcgcggcggcggatgctgttcaacggc
atggtgctgggcagcttcgcggtagacgacgaaggctacctgatcggtgacccgaaggtc
agcgcgcccggcctgctggatgccgaagaccccgaaacccagcgcgtgaccgaggaattc
ggcaatgcgctggatgaaatccccgatgaactgcgtgaaaacgacgcgaccttccgcgaa
gcggccaagaccgccctgcgccgcgcgctgggccgcaagctgcagaagcgcccgctggtg
gatgtgcacctgctgcgggtatag
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