Komagataeibacter xylinus: H845_2209
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Entry
H845_2209 CDS
T03044
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gxl
Komagataeibacter xylinus
Pathway
gxl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gxl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H845_2209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gxl03021
]
H845_2209
03400 DNA repair and recombination proteins [BR:
gxl03400
]
H845_2209
Enzymes [BR:
gxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H845_2209
Transcription machinery [BR:
gxl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H845_2209
DNA repair and recombination proteins [BR:
gxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H845_2209
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AHI26139
LinkDB
All DBs
Position
complement(2375479..2376498)
Genome browser
AA seq
339 aa
AA seq
DB search
MVLQKNWQSLIKPEKLEVEPGAEPSRIATVVAEPLERGFGMTLGNAIRRVLLSSLQGAAV
TAIQIDGVLHEFSSVAGVREDVTDIVLNIKQLALRMHGEGPKRMVLTATGPGEVRAGQIQ
TGHDIEVMNPDLVICTLDEGVKFGMEFTVNMGKGYVPAAANRPEDAPIGLIPVDAIYSPV
RRVSYKVEQTRVGQVTDYDRLLLTVETNGAVTPEDAVALAARILQDQLQLFINFDEPRTV
RTEEPQDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEQEMLRTPNFGRK
SLNEIKEVLTAMGLSLGMNVPAWPPENIEDLAKRLDEPF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttggtcctccagaaaaactggcaatccctgatcaagccggaaaagctggaagtcgaaccg
ggggcggaaccttcacgcattgccaccgtcgttgccgaaccgctggaacgcggctttggc
atgacgctgggtaacgcgatccgtcgggttctgctgtcgtccctgcagggggctgcggtt
acggcaatccagattgacggcgtgctgcatgaattctcgtccgtggcgggtgttcgtgaa
gacgtgaccgacatcgtgctcaacatcaagcagctcgcactgcggatgcatggtgagggg
ccgaagcgcatggtgctgacggccacaggcccgggcgaagtgcgtgccggacagatccag
acgggtcatgatatcgaagtcatgaaccctgatctcgtgatctgcacccttgatgaaggg
gtgaagttcgggatggaatttaccgtgaacatgggcaaggggtatgtccccgcggcggcc
aaccgcccggaagacgcaccgattggcctgatcccggttgatgccatctactccccggtt
cgccgcgtgtcctataaggtggaacagacccgcgtgggtcaggtcaccgactatgaccgc
ctgctgctgacggtcgagacgaatggcgcggtcacgccggaagatgccgtggcgcttgcc
gcgcgtatccttcaggaccagctccagctgttcatcaacttcgacgaaccgcgcacggtg
cgtacggaagagccgcaggatgacctgccgttcaaccgcaacctgctgcgcaaggttgac
gaactggaactgtcggtccgtagcgcgaactgcctgaagaacgacaacatcgtctatatc
ggtgatctggtccagaaaaccgagcaggagatgctgcgcacgccgaacttcggccgcaag
tcgctcaacgagatcaaggaagtcctgactgccatggggctttcactgggtatgaatgtc
ccggcgtggccgccggaaaatatcgaagatctggccaagaggctcgacgagccgttctga
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