KEGG   Komagataeibacter xylinus: H845_2454
Entry
H845_2454         CDS       T03044                                 
Name
(GenBank) helicase, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
gxl  Komagataeibacter xylinus
Pathway
gxl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gxl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    H845_2454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gxl03400]
    H845_2454
Enzymes [BR:gxl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     H845_2454
DNA repair and recombination proteins [BR:gxl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     H845_2454
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 OB_YrrC SH3_13 UvrD_C_2 HHH_5 Viral_helicase1 HHH_2 AAA_11 nSTAND3 NAT10_TcmA_helicase PIF1 RsgA_GTPase NTPase_1 MeaB AAA_16 AAA_29 TraI_hel_assoc_N NPHP3_N ABC_tran AAA_22 UvrD-helicase DEAD ATP_bind_1 AAA_28 SLFN-g3_helicase AAA_23 AAA IstB_IS21 T2SSE TsaE MMR_HSR1 NB-ARC ABC_ATPase cobW NACHT TrwB_AAD_bind AAA_14 AAA_24 MobB HHH
Other DBs
NCBI-ProteinID: AHI26384
LinkDB
Position
complement(2634904..2637090)
AA seq 728 aa
MSGRAIDSSPTEALAGLVERVTFHNAENGFCVLRVKVRGQRDLVTVVGHAAMISAGEFVQ
MSGRWFNDHTHGLQFKAEFLKASPPTTVEGIERYLGSGMIRGIGPVYAKKLVKAFGEAVF
DLIEQEPGRLREVTGIGPKRAERIVAGWADQKVIREIMLFLHSNGVGTSRAVRIFKTYGQ
DAVKLISENPYRLAKDIRGIGFKTADQIARKMGIAPDAMIRVRAGISYALGEAMDEGHCG
LPVGELLTSTAELLEVAAPLIETALTLELEAGDVIADSVGETGCIFLAGLYRAEQSIAER
LRACAVGRPPWPEIDAEKAMTWVERKTGLALAPSQQEAVRLALNSKVLVITGGPGVGKTT
LVNAILKIVTAKGTDVQLCAPTGRAAKRLSESTGLEGKTIHRLLETDPASGTFKRDDTNP
LTCDLLVVDEVSMVDVLLMRSLLRAWPDSAALLIVGDVDQLPSVGPGQVLADIIGSGAVP
VVRLTEVFRQAAQSRIITNAHRINEGKMPELSAEEGSDFYFVEAAEPEVGLRKLLAVVKD
RIPARFGLDPVRDVQVLCPMNRGGLGARSLNIELQQALNPPGEVKVERFGWTYGPGDKVM
QIANDYDRDVFNGDLGVIDRIDVEEGELTVSFDGRDVAYGFGELDELVLAYATTIHKSQG
SEYPAVVIPLVTQHYAMLARNLLYTGVTRGRKLVVLVGQKKALAIAVRNQGGRRRWSKLR
EWLVGSFA
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgagcgggcgcgccatcgactcttcgcccacggaagcgctggctggcctcgtggagcgg
gtgacgttccacaacgccgagaacggcttctgcgtcctgcgggtgaaggtgcgggggcag
cgcgatctggtcaccgttgtcggccatgccgcaatgatctcggcaggcgagttcgtgcag
atgtcggggcgctggttcaacgaccacacccacgggttgcagttcaaggcggagtttctc
aaagccagtccgccgaccacggttgaggggatcgagcgctatcttggctccggcatgatc
cggggcatcggtccggtctacgcgaagaagctggtgaaagcgttcggcgaggcagtgttc
gatctgatcgagcaggaacctggacgcctgcgggaggtgacgggcatcggccccaagcgt
gccgaacggatcgtcgccggttgggcagaccagaaggtgatccgcgagatcatgctgttt
ctgcacagcaacggcgtcggcacctcgcgggcggtgcgtatcttcaagacctacgggcag
gacgcggtcaaactgatcagcgagaacccctaccggctcgcgaaggacatccgggggatc
ggattcaagaccgccgaccagattgcccggaagatggggatcgcacccgacgccatgatc
cgcgtgcgggcagggatctcctatgcgcttggcgaggccatggatgaggggcattgcggt
ctgccggtcggggagttgctgaccagcaccgccgaactgctggaggtcgcggcacccctg
atcgagacggctctcacgttggagctggaggcgggcgacgttattgccgacagcgtgggc
gagacgggatgcatcttcctggcgggtctctatcgcgcggagcagagcatcgccgagcga
ttgcgtgcctgtgccgtcggccgtccgccctggcccgagatcgacgctgaaaaggccatg
acctgggtggaacggaagaccgggcttgcgctcgcgcccagccagcaggaggcggtgcgc
cttgccctgaacagcaaggtgctggtgatcacgggtggtcctggcgtgggcaagaccacg
ctggtcaacgccatcctcaagatcgtgaccgccaagggcacggacgtgcagctctgcgcc
ccgaccggccgggcggcgaagcgcctgtcggaaagcaccggactggaaggcaagaccatc
catcgactgctggagacggatccggccagtggcaccttcaagcgggatgataccaacccg
ctgacctgcgatcttctggtcgtggacgaggtcagcatggtcgatgtgctgctgatgcga
tccctgctgcgcgcctggcccgacagcgcggctctgctgattgtgggcgacgtggaccag
ttgccgtcggtcgggccggggcaggtgctggccgacatcatcggctccggtgctgtccct
gtggtgcggctgaccgaggtgttccgccaggcggcgcagagccggatcatcaccaatgcg
caccggatcaacgaagggaagatgcccgaactgagcgcggaagagggatcggacttctat
tttgtcgaagcggccgagcccgaggtcgggctgcgcaagctgctggccgttgtgaaggac
cgcatcccggcgcggttcgggctggacccggtccgcgacgtgcaggtgctgtgtccgatg
aaccggggcgggcttggggcgcggtcgctgaatatcgaattgcagcaggcgctgaacccg
ccaggcgaggtgaaggtcgagcggtttggctggacctatggtcccggcgacaaggtgatg
cagatcgccaatgactatgaccgggatgtcttcaacggggatcttggcgttattgacagg
atcgatgtggaagagggcgaactgacggtctcatttgacggcagggatgtggcttatggc
ttcggggaactggatgaactggtgctcgcctacgcgaccaccattcacaagagtcaggga
tcggaatacccggcggtggtgatcccactggtgacacagcattacgccatgctggcgcgg
aacctgctctataccggcgtgacacgggggagaaagctcgttgtgcttgtggggcagaag
aaggcattggccatcgccgtgcgcaatcagggcgggaggcggcggtggtcgaagctcaga
gaatggctggtgggtagttttgcatga

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