Komagataeibacter xylinus: H845_2550
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Entry
H845_2550 CDS
T03044
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gxl
Komagataeibacter xylinus
Pathway
gxl03410
Base excision repair
gxl03430
Mismatch repair
gxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H845_2550
03430 Mismatch repair
H845_2550
03440 Homologous recombination
H845_2550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gxl03400
]
H845_2550
DNA repair and recombination proteins [BR:
gxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
H845_2550
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H845_2550
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H845_2550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AHI26473
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Position
2742071..2743921
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AA seq
616 aa
AA seq
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MSAADLLSPHPASPAPQEEKQEPAVLGVTRSVTGRRWNWREGGQASHTDRMGMAIAQQTG
LPEIVGRMLALRRIAPEQVATYLAPTLRALMPDPSTFTDMDAAATRLATAIRNGETVGLF
GDYDVDGACSTALLTDFLRRQGCTVLTHIPDRMTEGYGPNAPALAAMQDQGATLIVCLDC
GTAAVAVLEHASGRGDVIVLDHHQVQGALPRVLATVNPNRPDCPSGLHGICAAAVTFMTV
VATVRILRRDGWFESRPDPQLMDSLDLVALATVCDVMPLSGLNRAFVTQGLKVMARRQRT
GLSALLDAAGARDPLSAFTCGFALGPRINAGGRIADSGLGLRLLLCEDAAEAQALSEKLN
SVNHNRQGVESGILDRAMELAAAQRAQGHAVLVLSGRDWHPGVVGIVAGRIKEKFNRPVL
VGAEMEDGSVKGSARSVPGLDLGGAIIAARQAGLLSSGGGHAMAAGFGLPADGIPALHEF
LDRHLASAASLPDAVDLTIDAVVNVAAADVALATDMDRLAPFGAGNDEPLIALPRVRVAY
AERIGREGNTLRLTLQGEGRGPRLKALVFRAHESPLATVLEDRDSPPLHLAGWLRAESWN
GRTSATFFIRDAAIAQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgccgacctgctttccccccatcccgcgtcccccgcgccacaggaggaaaag
caggagccagccgtgctgggcgttacccgcagtgttacgggccgccggtggaactggcgc
gagggcgggcaggccagccataccgaccgcatgggcatggccattgcgcagcagaccggg
ctgcccgaaatcgtgggccgcatgctggccctgcgccgcatcgcgcccgaacaggttgca
acctaccttgcccccaccctgcgcgcgctgatgcccgacccgtccaccttcacggacatg
gatgcagcggccacccgcctggccaccgccatccgcaacggggaaacggtgggcctgttc
ggggattatgatgtggatggcgcgtgttccacggcgcttctgaccgatttcctgcgccgt
cagggctgcacggtgctgacgcatattcccgaccgcatgacggaaggctacggcccgaac
gcgcccgcacttgcagccatgcaggaccagggcgcgaccctgatcgtctgcctggactgc
ggcacggcggcggtggcggtgctggaacacgcaagcgggcgcggtgacgtcattgtcctt
gaccaccatcaggtgcagggcgcgctgccgcgcgttctggccacggtcaacccgaaccgg
cccgactgcccttcgggactgcacggcatctgtgccgccgcggtcacattcatgaccgtg
gtggcaacagtgcgcatcctgcgccgtgacggatggtttgagtcccgtcccgacccgcag
ttgatggacagtctcgacctcgtggcgctggcgaccgtatgcgatgtcatgccgttaagc
ggcctgaaccgcgcctttgtcacgcaggggctgaaggtcatggcgcggcggcagcgcacg
ggactgtccgccctgctggatgcggctggcgcgcgtgacccgctttcggcatttacgtgt
ggattcgcgctgggtccgcgcatcaatgccggtggacgtatcgcggattccggcctggga
ctgcgcctgttgctgtgcgaagacgcagccgaagcgcaggcattgtcggagaagctgaat
tccgtcaaccacaaccggcagggcgtcgaatccggcatccttgaccgcgccatggaactg
gcggccgcccaacgcgcgcagggccatgccgtactggtgctgagcggccgggactggcac
cccggcgtggtcgggatcgtggccggacgcatcaaggagaaattcaaccgccccgttctg
gtgggagcggaaatggaggatggcagcgtaaaaggctccgcccggtccgttccggggctg
gaccttggtggcgccatcatcgcggcacggcaggcggggttgctgtcatcgggcggcggc
catgccatggcggcgggattcggcctgccggcggatggcatccctgccctgcatgaattc
cttgaccgccacctggcctccgccgccagcctgcctgacgccgtagacctgacgattgac
gccgtggtgaatgtggccgccgccgatgtcgcccttgcgaccgacatggaccgcctggcc
ccctttggcgcgggcaatgacgaacccctgattgccctgccccgcgtgcgcgtggcctat
gccgaacggatcgggcgggaaggcaataccctgcgcctgaccctgcagggtgaaggccgt
ggcccccggctgaaggcactggtgttccgcgcccatgaaagcccgctggccaccgtgctg
gaagatcgtgacagcccaccgctgcatctggcgggatggctgcgtgccgaaagctggaat
ggccggacatccgccacttttttcatccgtgacgcggcaatcgcccaataa
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