Komagataeibacter xylinus: H845_2675
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Entry
H845_2675 CDS
T03044
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gxl
Komagataeibacter xylinus
Brite
KEGG Orthology (KO) [BR:
gxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gxl03016
]
H845_2675
Enzymes [BR:
gxl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
H845_2675
Transfer RNA biogenesis [BR:
gxl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H845_2675
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHI26596
LinkDB
All DBs
Position
complement(2883762..2884949)
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AA seq
395 aa
AA seq
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MARVSRPEFPAPVLVTTTAELEAVTARLRHEPFVTIDTEFVRERTYWPELCLVQLAGEKD
VVVIDTTAPGIDLSPLGALLDDASVVKVFHAARQDLEIFLHLFDHLPAALFDTQVAAMVA
GYGDQVGYDNLVSSLLGVQIDKSHRFSDWAARPLSPAQIGYAAADVTYLRLVYEKLLVQL
EREGRLDWVAAELDILNNPTTFRPDPLTLWEKMRPRTNNRRMLGILRAVTAWREGEAQRV
NVPRQRLLKDESLMEIAATAPGTVDALARVRGVSRGFAEGRSGQALLETVAQAVVEPEAT
LPRLPKGRAKDAQRPSPALIALLKVLLATCCETHRVAPKLVASSEDLDRFALDDEADIPA
FHGWRNEVFGKLARELKAGHLTMGVGGGKVRLIQA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgtatcccgacccgaatttcccgcccctgtgctggtgaccaccacagcggag
cttgaggctgtaaccgcgcgactgcggcatgagccatttgtgacgatcgacaccgaattc
gtgcgcgaacggacttactggcccgagctgtgcctggtgcagctggccggggaaaaggac
gtggtggtgatcgatacgaccgcgccgggcatcgacctgtccccgctcggcgcgctgctg
gatgatgccagcgtggtcaaggtgttccatgcggcacggcaggacctggaaatcttcctg
catctgttcgaccacctgccggccgccctgttcgatacgcaggtcgcggccatggtggcg
ggatatggcgaccaggtgggctatgacaacctcgtttcctccctgctgggtgtgcagatt
gacaagtcacaccgtttttccgactgggcggcgcgtccgctttccccggcccagatcggg
tatgccgcggcggatgtcacctatctgcggctggtttatgaaaagctgctggtccagctg
gaacgcgaagggcgtctggactgggtcgcggccgaactggatatcctgaacaatccgaca
acgttccgtcctgacccgctgacattgtgggaaaagatgcgcccgcgcaccaacaaccgc
cggatgctgggcatattgcgcgccgttaccgcatggcgcgagggcgaggcccagcgggtc
aatgtgccgcgccagaggctgctcaaggatgaaagcctgatggaaatcgcagcgaccgcg
cccggtacggtcgatgcgctggcccgcgtgcggggtgtctcacgcggttttgccgaaggg
cgcagcggccaggccctgctggaaaccgtggcgcaggctgtcgtggaaccggaagccacc
ttgccgcgcttacccaagggccgggcaaaggatgcgcagcgtccgtcaccggcgctgatc
gcgttgctcaaggtgttgctggccacctgttgcgagacgcatcgtgtcgcacccaagctg
gtggcctcgtccgaggaccttgaccgtttcgcgctggatgacgaagctgacatccccgct
tttcatggctggcgtaacgaggtattcggcaagctggcgcgtgaactcaaggccggccac
ctgaccatgggggtcgggggtgggaaggtcaggctgatccaggcttga
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