Komagataeibacter xylinus: H845_3115
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Entry
H845_3115 CDS
T03044
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
gxl
Komagataeibacter xylinus
Brite
KEGG Orthology (KO) [BR:
gxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gxl03016
]
H845_3115
03036 Chromosome and associated proteins [BR:
gxl03036
]
H845_3115
Transfer RNA biogenesis [BR:
gxl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
H845_3115
Prokaryotic type
H845_3115
Chromosome and associated proteins [BR:
gxl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
H845_3115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
Pyr_redox_2
FAD_oxidored
FAD_binding_2
Pyr_redox
HI0933_like
DAO
AlaDh_PNT_C
Lycopene_cycl
Trp_halogenase
NAD_binding_8
Pyr_redox_3
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AHI27019
LinkDB
All DBs
Position
complement(3333294..3335165)
Genome browser
AA seq
623 aa
AA seq
DB search
MSRVYDVIVVGGGHAGCEAASAAARTGARTMLLTHRLETIGIMSCNPAIGGIGKGHLVRE
IDALDGLMGVAADRAGIHFKLLNRSKGPAVHGPRAQADRSLYRQAIQDLLARTEGLDIVE
GAAGDLLVDGQGRVGGVVCEDGRTFACGAVVLATGTFLRGTIHVGHDSQPAGRVGDRPAN
ALGERLAALGLRMGRLKTGTPARIARDSIDWDTLAEDRGDAVPEPFSRMTDAITNPMVSC
RITATTPRTHEIIRENLQRSALYGGAISGRGPRYCPSIEDKVVRFAQRESHQIFLEPEGL
PGSPDGELVYPNGISTSLPESVQVDMLRSIPGLERCRIVRPGYAVEYDYVDPRELAPTLE
LKNMPGLFLAGQVNGTTGYEEAGAQGLLAGVNAARCAGGLAGVTLDRGEAYIGVMIDDLT
TQGVSEPYRMFTSRAEYRLTLRADNADLRLTPRGLEWGCVGAARAQRYRMDCAAIEAATE
RARNETYNPDTLRRAGVNVSADGRARSLVDVLATDVSSETLARIAPWFADLPPRVAQHLA
TEARYSGYISRQDREIRQLASEGRMTLPVDLDYAQVGGLSTEMQERLAQVRPVTFGAAQR
IPGITPSALVALLAHVRQRQVAV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcgtatatgatgtgattgtcgtgggtggcggccatgcggggtgcgaagccgca
tccgccgccgcgcgcacgggtgcgcggacgatgctgctgacgcatcggctggagaccatc
ggcatcatgtcctgcaatccggccattggtgggatcggcaagggccatcttgtacgcgaa
attgatgcgcttgatggcctgatgggagttgccgctgatcgggccggaattcatttcaag
ctgctgaaccgctccaaggggccggccgtgcatggtccgcgcgcgcaggcggaccgctcg
ctctaccgtcaggccatacaggacctgctggcccgaaccgaagggctggatattgtcgaa
ggcgcggcgggagacctgctggtcgatggacagggccgggtcgggggcgttgtctgtgaa
gatggccgtacctttgcctgtggcgccgtggttctggcgacgggcacgttcctgcgcggg
acaatccatgtcgggcatgacagccagcccgcgggaagggtaggggaccgacccgcgaat
gcgctgggggaacgtctggccgcactggggctgcgcatggggcggctcaagaccggcacg
ccggcccgtatcgcgcgcgacagcatcgactgggacactttggcggaagaccggggtgac
gccgtgccggaacccttcagccgcatgacggacgccatcacgaaccccatggtgtcatgc
cgcattacggccaccacgccgcgcacgcatgagatcatacgcgaaaaccttcagcgctcc
gccctgtatggcggggcgatctcggggcgggggccgcgttactgcccatcgatcgaggat
aaggtcgtgcggttcgcgcagcgtgaatcccaccagatattcctggaacccgaaggcctg
cccggctcgcccgatggggaactggtctatcccaatggcatttccaccagcctgcccgaa
agcgtgcaggtggatatgctgcgcagcatccccgggctggaacgctgccggatcgtaagg
cccggctacgcggtggaatatgattatgtggacccgcgcgaactggcgcccacgctggaa
ctgaaaaacatgccgggcctgttccttgccggtcaggtcaacggcacgaccgggtatgag
gaagccggggcgcagggactgctggccggtgtcaacgccgcccgctgtgccggggggctg
gcgggtgtgacccttgatcgtggggaagcttatatcggcgtgatgattgatgacctgacc
acgcagggtgtgtctgaaccctatcgcatgtttacgtcgcgcgccgagtaccgcctgacc
ctgcgggcggataacgccgacctgcggctgaccccgcgtggactggaatgggggtgcgta
ggggcagcgcgtgcgcaacggtaccgcatggactgtgccgcgatcgaggcggcaactgaa
cgtgcccgcaatgaaacctataatccggataccctgcgccgggccggggtgaatgtctcg
gctgacgggcgggcgcgctcgcttgtggatgtgctggccacggatgtatcgtccgaaacg
ctcgcccggatcgcgccgtggtttgcggacctgccgccccgcgtggcccagcatctggcg
accgaagcccgctatagcggctatatttcccggcaggatcgtgaaatccgccagttggcc
agtgaagggcgcatgaccctgccggtggatctggattatgctcaggttggtggcctgagt
acggaaatgcaggaaaggctggcgcaggtccggccggtgacgtttggcgcggcacagcgt
attcccggcattacgccgtcggcgctggtcgccctgctggcgcatgtgcggcaaaggcag
gtcgcggtatga
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