Komagataeibacter xylinus: H845_383
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Entry
H845_383 CDS
T03044
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
gxl
Komagataeibacter xylinus
Pathway
gxl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H845_383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gxl03400
]
H845_383
DNA repair and recombination proteins [BR:
gxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H845_383
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H845_383
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
DUF4350
DnaJ_CXXCXGXG
nSTAND1
BCA_ABC_TP_C
AAA_21
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AHI24344
LinkDB
All DBs
Position
399460..402498
Genome browser
AA seq
1012 aa
AA seq
DB search
MSVSSRPEQVPAAQHVSPQSIRVRGARAHNLKNVDIDIPRDALTVMTGLSGSGKSSLAFD
TIYAEGQRRYVESLSAYARQFLELMGKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTE
VHDYMRLLWARAGVPYSPATGLPIEAQTISQMVDRVMAMPEGTRLMLLAPVLRDRKGECK
KELAELQRKGFTRAKVDGTLYSIDEVPELNRRLRHTVEAVVDRIVVKEGIETRLADSFET
ALGLSDGLVYAEEVVKDLPEGAEAPRTVFSSRFACPVSGFTLEEVEPRLFSFNAPQGACP
ACDGIGQETFFDPRLIVPDESLSLAAGAIAPWRNSQSPYYTQTLAAIAKHYGVSMDTPWE
DLPAGVRDVILEGGKDPIEFTYRDDRRAYSLTKPFEGVVTNLRRRMAETDSVWVREELSR
YQSEKPCHVCDGARLRPEALSVRVAGLNIAQASDMPIRKALDWFGTVEATLTPQRAEIAH
RILREILDRLRFLDDVGLDYLTLSRGSATLSGGESQRIRLASQIGSGLTGVLYVLDEPSI
GLHQRDNERLLGTLDRLKKLGNTLIVVEHDEDAIRAADWLIDMGPGAGVNGGTVVAAGTP
QEVAANPNSLTGDYLSGRKCIPVPAKRRKIDPKRELVLRGATGNNLKDVTAKFPLGTFTC
VTGVSGGGKSTLVIDTLYKALSRKLMGSGQNPAPYAAIDGLDQLDKIIDIDQSPIGRTPR
SNPATYTDLFGPIRDWFAELPESKARGYKPGRFSFNVKGGRCEACQGDGVLKIEMHFLPD
VFVTCDTCKGARYNRETLDVKFRGKSIADVLAMSVDEALPYFSAVPRIRDRLAILQKVGL
GYVALGQQATTLSGGEAQRVKLSKELARRATGRTLYILDEPTTGLHTEDVRKLLEVLHAL
VDQGNTVVVIEHNLEVIKTADWVIDMGPEGGDGGGRIVACGTPEQVAASPDSHTGRFLRP
LLEHKPLVPVPTPDAKPAARIGARGKKATAAKASDPAKKKGKPAKTGRKSVK
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtttcttcgcgtccggaacaggttccggcggcacagcatgtcagcccgcaatcc
atccgtgtacgcggggcacgggcgcataacctgaaaaatgtcgatatcgacataccccgt
gacgcgttgacggtcatgaccgggctgtcggggtcgggcaagtcctcactggcgttcgac
accatctatgccgaaggccagcggcggtacgtggaaagcctttctgcctacgcgcggcag
ttccttgaactcatgggcaagcccgatgtcgactcgatcgaggggctgtcccccgccatc
tccatcgaacagaagacgacatcaaagaatccccgctccaccgtcggcaccgtgaccgag
gtgcatgactacatgcgccttttgtgggcgcgcgcgggcgtgccgtattcgcccgccacc
ggcctgccgatcgaggcgcagaccatcagccagatggtcgatcgcgtcatggccatgcca
gagggcacgcgcctcatgctgctggccccggtgctgcgcgaccgcaagggcgagtgcaag
aaggaactggccgaactgcagcgcaagggcttcacccgcgccaaggtggacggtacgctg
tactcgattgacgaggtacccgaactcaaccgccgcctgcgccacacggtcgaggcggtg
gtggaccgcatcgtggtcaaggaaggcatcgaaacccgtctcgccgacagcttcgagacg
gcgctcggcctgtcagacggcctggtctatgccgaagaggtggtgaaggacctgcccgaa
ggcgcggaagccccgcgcacggtgttctcatcgcgtttcgcctgcccggtcagcggcttt
acgctggaagaagtcgaaccccgcctgttttccttcaacgcgccgcagggggcgtgcccg
gcctgtgatggcatcgggcaggaaacctttttcgacccgcgcctgatcgtgcccgacgaa
tcgctttcgctggctgcgggtgccattgccccctggcgcaacagccagagtccgtactac
acccagacgctggccgccatcgcgaagcattacggcgtgtcgatggatacgccgtgggaa
gacctgcccgcaggcgtgcgcgacgtgatccttgaaggcgggaaagacccgatcgagttc
acctatcgcgacgaccgccgcgcctacagcctgaccaagccgttcgagggcgtggtgacc
aacctgcgccgccgcatggcggaaaccgacagcgtatgggtgcgcgaggaactgtcgcgc
taccagtccgaaaagccatgccatgtgtgcgatggcgcgcgcctgcggcccgaagccctg
tcggtcagggttgcggggctgaacatcgcgcaggcatccgacatgcccattcgcaaggcg
ctggactggttcggcacggtggaagcgacgctgacgccccagcgggccgagatcgcgcac
cgcatattgcgtgaaatccttgatcgcctgcgattccttgatgatgtgggtctggattac
ctgaccctgtcgcgcgggtcggccacgctgtcgggcggggaaagccagcgcatccggctt
gccagccagatcggctcggggcttacgggcgtgctgtatgtactcgacgaaccctccatc
gggctgcaccagcgcgacaatgaacgcctgctgggcacgctggaccggctgaagaagctg
ggcaacaccctgatcgtggtcgagcatgacgaggatgcgatccgcgccgccgactggctg
atcgacatggggccgggtgcgggcgtgaatggcggcacggtcgtggccgccggcacgcca
caggaagtggccgcgaaccccaacagcctgacgggggattacctgtcggggcgcaaatgc
attcccgtgcccgcaaaacgccggaagatcgaccccaagcgcgaactggtgctgcggggg
gccacgggcaacaacctgaaggatgtgacggccaaattcccgctgggcacctttacctgt
gtgaccggggtttcgggcggtggcaagtccacgctggtgatcgacacgctgtacaaggcc
ctgtcgcgcaagctcatggggtcggggcagaacccggcaccctatgcggccatcgacggg
ctggaccagctcgacaagatcatcgatatcgatcagtcgcccatcgggcgcacgccgcgt
tccaacccggccacctataccgatctgttcggtcccatccgcgactggtttgccgaactg
cccgaaagcaaggcgcgggggtacaagccgggccgcttctcgttcaacgtcaagggcggg
cggtgtgaggcgtgccagggcgacggggtgctgaagatcgagatgcacttcctgcccgac
gtgttcgtgacctgcgatacctgcaagggggcgcgctacaaccgcgagacgctggacgtg
aagttccgcggcaagtcgattgccgatgtgctggccatgtcggtggatgaggcgctgccc
tatttctccgccgtgccgcgcatccgcgaccggctggccatattgcagaaggtggggctg
ggttacgtcgcccttggccagcaggcgaccacgctttcggggggcgaggcgcagcgcgtc
aagctgtccaaggaactggcgcgccgggccacgggccgcacgctgtacatcctcgatgaa
cccaccaccggcctgcataccgaagacgtgcgcaagctgctggaggtgctgcacgcgctg
gtggaccaggggaacacggtggtggtgatcgaacataacctggaggtcatcaagaccgcc
gactgggtgatcgacatggggccggaagggggcgatggcggcggccggatcgtggcctgc
ggcacgcccgaacaggtggccgccagccccgacagccatacggggcgattcctgcggccg
ttgctggaacacaaaccgcttgtgcctgttcccacaccggatgcgaagcctgcggcccgg
atcggggcgcgcggcaaaaaagccacagcggccaaagcgtccgatcccgccaaaaagaag
ggaaaaccggcaaaaaccggtcgtaaatctgtaaaataa
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integrated database retrieval system
