Komagataeibacter xylinus: H845_605
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Entry
H845_605 CDS
T03044
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
gxl
Komagataeibacter xylinus
Brite
KEGG Orthology (KO) [BR:
gxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gxl03016
]
H845_605
Enzymes [BR:
gxl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
H845_605
Transfer RNA biogenesis [BR:
gxl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
H845_605
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
DprA_N
Motif
Other DBs
NCBI-ProteinID:
AHI24563
LinkDB
All DBs
Position
complement(654908..655459)
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AA seq
183 aa
AA seq
DB search
MRLFVGLELPPTLLHAIGELRGGLPDVAWLPPETYHLTLRFIGEVTHPHLLEEIHHALSA
IRATPPVLRLDGTGLFTPTRPNAPDTLWVGCAPDDALLTLREKVRKGLNRAIPAGGERNG
RHFTPHVTIGRMERPDQARRQRWLATTLPTTEARTIGHFTLFQSIRHADGPFYEPLEHYP
LHF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttttcgttggcctggaacttccacccacgctgcttcatgcgatcggtgaatta
cggggcggcctgcccgatgttgcgtggctcccgcctgaaacctaccaccttaccctgcgt
ttcatcggggaggtcacccatccccacctgttggaagaaatccatcatgccctttccgcc
atccgcgccacgccgcctgtcctgcggctggatggaacggggctgtttacacccacccgc
ccgaacgcaccggatacgttatgggttggctgcgcgcccgacgacgccctgttgacgctg
cgcgagaaggtccgcaagggcctgaaccgtgcaattccggccgggggcgaacggaacggc
cgccactttaccccgcatgtcaccatcggccggatggaacgccccgaccaggcccgcagg
caacgctggcttgcgaccacgcttcccacgaccgaggcgcggacgatcggccatttcacc
ctgttccagtccatacgccacgcggatgggccattttacgagccactggaacattatccg
ttacacttctga
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