Komagataeibacter medellinensis: GLX_08590
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Entry
GLX_08590 CDS
T01631
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gxy
Komagataeibacter medellinensis
Pathway
gxy03030
DNA replication
gxy03430
Mismatch repair
gxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLX_08590
03430 Mismatch repair
GLX_08590
03440 Homologous recombination
GLX_08590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gxy03032
]
GLX_08590
03400 DNA repair and recombination proteins [BR:
gxy03400
]
GLX_08590
Enzymes [BR:
gxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GLX_08590
DNA replication proteins [BR:
gxy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GLX_08590
DNA repair and recombination proteins [BR:
gxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GLX_08590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PucR
Motif
Other DBs
NCBI-ProteinID:
BAK83271
UniProt:
G2I574
LinkDB
All DBs
Position
complement(999590..1003024)
Genome browser
AA seq
1144 aa
AA seq
DB search
MSHADFVHLRVHSAYSLSQGAIRVPELVALAHDMRMPAVAITDTGNMFGALEFSQYCAKK
GVQPIIGCQLGLPARSDKPGMPAEHVALLARNAEGLANLQFLSSAGFLQNVTDEPTVTLD
LLCERAGGLFLLTGGSRGPLFHMLAEGQEREATRFMERLHEAYGRYMAVELHRHGQAAER
AVEPGMIAMADRMGLPLVATNECFFPKPDMYEAHDALLCIAQGRTMAERDRWRVTPEHWF
KPAEVMRELFADLPEACDNTLEIARLCAIKVETCKPLLPMCPKVQPGKTEDETLRNMAQT
GLAHRLSRMTVDDETRRKYEERLAFELDIIANMGFPGYFMIVADFIQWAKEHDIPVGPGR
GSGAGSLAAWALTITDIDPIPFNLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVRNEY
GADRVAQIITFGKLQARAAVRDVGRVLGLPFGMVNRVAELIPNNPAQPVTLKQAIEGEPR
LQEMRDEDEAIRRLMEIGQQLEGLFRHASTHAAGVVIGDRELVELVPLYRDPKSDMLVTQ
YNMKFVEQAGLVKFDFLGLTTLTILQRAVQFLHGMGVEVDLSVLPLDDALTYEMLARGDT
GGVFQFEGAGMRDVLKQMRPTRLEDLIAAVALYRPGPMANIPDYCRRKHGEAWEPPHEEI
RDILEETYGIMVYQEQVMQIAQKMAGYSLGGADLLRRAMGKKIRAEMDRQREIFTEGAMK
RGIEREKAAEVFDLMAKFADYGFNKSHAAAYALVSYQTAWMKANHPVPFIAACMSLAREK
TDKLAGLRQEADRLGIPLLPPDINASGADFTVEKMPDGKTYGIRYALAAVKKVGLGAMQS
LVAVRGDRPFTDLEDLAARLDPRQVNKMQLENLARAGAFDTILPNRARACAAAETVMRRA
QANAQQAASGQIGLFGGGGDGPAQREPLRLPRVADWPEFERLNMEADAIGFHLTGHPLDS
YGPLMRRLGAVRATGLEAAAQAGIVRVKIAGCVVDRKERPTRTGNKMAWVRLSDASGGCE
ITFFSEVLSRAREILVAGNAVVVTADLKLEGEALRITASDVMELEQAAAEAAAEMRIWFD
RAEALEPIRDVLHGHGAGRGRVILLPSVTETRDVELTLAERYRVTPRVAQMIKAIEGVGK
VEQF
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgccgattttgtccaccttcgggttcactccgcctattccctgagccagggg
gccattcgcgtgcccgaactggtggcgctagcgcatgacatgcgcatgcccgccgtggcc
ataaccgataccggcaacatgttcggtgcgctggagttctcgcaatactgcgccaagaag
ggcgtgcagcccatcattggctgccagcttggcctgcccgcgcgtagcgacaagcccggt
atgcccgccgaacatgtagcgctgttggcgcgcaatgcggagggactggccaacctgcag
ttcctctcttcggccgggttcctgcagaacgtgaccgatgagccgactgtcacgctggac
cttttgtgcgagcgtgcgggcggtctgttcctgctgaccggcggcagccgtggcccactg
ttccacatgctggcggaagggcaggagcgcgaggccacccgcttcatggagcgcctgcac
gaagcctatggtcgctacatggcagtcgaactgcaccgccacggccaggcggccgagcgc
gcggtggaaccgggcatgattgccatggccgaccgcatgggcctgccgctggtggccacc
aatgaatgtttcttcccaaaaccggatatgtacgaggcgcatgacgcgctgctgtgcata
gcgcagggccggaccatggccgagcgtgaccgctggcgcgtcacgccggagcactggttc
aagcccgccgaggtcatgcgcgaactgtttgccgacctgcccgaagcctgtgacaacacg
ctggagatcgcgcgcctgtgcgcgatcaaggtcgagacatgcaagccgctgctgcccatg
tgccccaaggtacagcccggcaagacggaagatgagaccctgcgcaacatggcgcagacc
ggcttggcccaccgcctgtcgcgcatgacagtggatgatgagacgcgccggaaatacgag
gaacgactggcgtttgaactcgatatcatcgcgaacatgggctttcccggctatttcatg
atcgtggccgacttcatccagtgggccaaggaacatgatatccccgtagggccgggccgt
ggctcgggtgcgggctcgctggcggcgtgggcgctgaccattaccgatatcgaccccatt
cccttcaacctgctgttcgagcggttcttgaaccccgaacgcgtgtcaatgcccgatttc
gacatcgatttctgtcaggaccggcgcgatgaggtgatccgctacgtccgcaatgaatat
ggtgcggaccgggtggcccagatcatcacgttcggtaagctgcaggcgcgtgccgcagtg
cgtgacgtggggcgcgtgctgggcctgccatttggcatggtcaaccgcgtggccgaactg
atccccaacaaccccgctcagcccgtcaccttgaaacaggcgatcgagggggagccgcgc
ctgcaggaaatgcgcgatgaggatgaggccatccgtcggctgatggaaatcggccagcag
cttgaggggctgttccgccacgccagtacccacgccgcaggtgttgtgatcggggaccgc
gaactggtggaactggtgccgctgtaccgtgaccccaagagcgacatgctggttacgcag
tacaatatgaagtttgtggagcaggcggggctggtcaagttcgacttccttggtctgacc
acgctgaccatcctgcagcgcgcggtgcagttcctgcacggcatgggggtggaggtggac
ctgtccgtcctgccgctggatgacgcgctgacctacgagatgctggcccgcggcgacaca
ggcggcgtgttccagtttgaaggtgcgggcatgcgcgacgtgctcaagcagatgcgcccg
acccggctggaagacctgattgccgccgtggcgctgtaccgccccggccccatggccaac
attcccgattattgccgccgtaagcatggcgaggcatgggagccgccgcacgaggaaatt
cgcgatatcctggaagagacctacggcatcatggtctatcaggaacaggtcatgcagatt
gcccagaaaatggcgggctacagcctgggtggggccgacctgctgcggcgtgccatgggc
aagaagatccgtgccgagatggaccgccagcgcgaaatctttaccgaaggggcaatgaag
cgcgggatcgagcgtgaaaaggctgccgaggtgttcgacctcatggccaagtttgccgat
tacgggttcaacaaatcccatgccgcagcctacgcgctggtttcgtaccagacggcgtgg
atgaaggcgaaccacccggtgccctttattgccgcgtgcatgtcgcttgcgcgtgaaaag
accgacaagctggccggcctgcggcaggaggccgaccggctgggcattcctctgctgccg
cccgacatcaatgcatcgggtgctgattttaccgtggaaaagatgcccgatggcaagacc
tacggcatccgttacgcgctggcggcggtaaaaaaggtggggctgggggccatgcaatcg
ctggtggcggtgcgcggcgaccggccctttaccgaccttgaggacctggccgcccgtctt
gacccccggcaggtcaacaagatgcagcttgaaaatctggcgcgcgcgggtgcgttcgac
accattctgcccaaccgtgcccgtgcctgcgccgcggccgagacggttatgcgccgtgca
caggccaatgcccagcaggcggccagtggccagatcggcctgtttggcggcggtggcgac
gggcccgcccagcgcgagccgctgcgcctgccgcgcgtggccgactggccggagttcgag
cgcctgaacatggaggctgacgccataggcttccacctgaccggtcacccgctggattcc
tacggcccgctcatgcgcaggctgggtgcggtgcgggccacggggctggaggcggcggca
caggcggggatcgtgcgcgtcaagatcgcgggttgcgtggtggatcgcaaggaacgcccc
acgcgcacgggcaacaagatggcgtgggtgcggctgtccgatgcatcgggcgggtgcgag
atcacgttcttttccgaagtgctgtcgcgggcgcgtgaaatactggtggcgggtaatgcc
gtggtggtaacggcggacctgaagctggagggcgaggccctgcgcattaccgcatccgac
gtgatggaactggaacaggcggccgccgaggccgcagccgagatgcgcatatggttcgac
cgcgcggaagcactggagccgatccgtgatgtgctgcacggccacggggcagggcggggg
cgggtcatcttgttgccgtcggttacggaaacgcgggatgtggaactgactttggccgag
cgctaccgcgtgaccccgcgcgtggcccagatgatcaaggcgatcgaaggtgttggcaag
gtggagcagttctga
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