Komagataeibacter medellinensis: GLX_10720
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Entry
GLX_10720 CDS
T01631
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gxy
Komagataeibacter medellinensis
Pathway
gxy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gxy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GLX_10720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gxy03021
]
GLX_10720
03400 DNA repair and recombination proteins [BR:
gxy03400
]
GLX_10720
Enzymes [BR:
gxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GLX_10720
Transcription machinery [BR:
gxy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GLX_10720
DNA repair and recombination proteins [BR:
gxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GLX_10720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Apocytochr_F_C
DUF5789
Motif
Other DBs
NCBI-ProteinID:
BAK83484
UniProt:
G2I5T7
LinkDB
All DBs
Position
complement(1222229..1226425)
Genome browser
AA seq
1398 aa
AA seq
DB search
MNELMKILGQGGQAMTFDQIKIQLASAEQIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLMVDMTLKDLEKILYFESYVVLEPGTSPLKQYSLLTEDQYLDVMDEHGDEGIEVG
IGAEAIKKILERIDCRQEKEELRQELKDTTSEAKRKKLVKRLKLVEAFADSESRPEWMIL
ELVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QESVDALFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYSKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLETPEFRATPDQNSYDDKGHPTVTG
APSFSSVGEVEYALSTGAVKLHDKIRARVDMLDADGKPVRETVVTTPGRMLVAQILPRHA
ALPFALINRQLTKKIVSDVIDAVYRHCGQKECVIFCDRLMGLGFRHAAKSGISFGKDDMI
VPTEKKELVDRTAAEVKEFEQQYQDGLITAGERYNKVVDAWSRCTDEVQAAMMKEISKQE
IGKPTNSVWMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIEQPIIANFKEGLSVLDYFT
SSHGARKGLADTALKTANSGYLTRRLVDVAQDSIIVEEDCGTERGLTVRAVMDGGEVIAS
LSERMLGRTLAADVLDPATGKVLFPRNTLIEEAQAEQIEKAGVESLLIRSVLTCDSRVGV
CGHCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSMVEASR
DGQVTIRNKNVVHNSQNVPIVMSRNCEILLTDDRGTERARYRVPYGARLLVEDGAAVTRG
QKMAEWDPYTLPIITEQPGKVEYLDLIDSITLVERMDEVTGLTSKVVVDYKQASKGIDLR
PRLQLKDANGDVVKLANGNDARYFLSPDSLLSVENGAQVNAGDVLARIPREGSKTRDITG
GLPRVAELFEARKPKDHAIISETEGRVEFGKDYKSKRRVIVKNDETGEETDYLIPKGKHV
SVQEGDFVQVGDPLVDGPRVPHDILKVLGVEALSDYLVNEIQDVYRLQGVKINDKHIEVI
VRQMLQKVEILEPGDTTYLIGETVDRIEYEEENTKRLNMGERPAAAMPVLQGITKASLQT
QSFISAASFQETTRVLTEAATAGKKDTLNGLKENVIVGRLIPAGTGSVMNKLRAVAAGED
KQRLAQARSTVATTKAAE
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactcatgaagatccttggccagggcggccaggccatgaccttcgaccagatc
aagatccagctggcttcggccgagcagatccggtcgtggtcgtatggcgagatcaagaag
cccgagaccatcaactaccggactttcaagccggagcgtgatggtctgttctgcgcacgg
atattcggtccgatcaaggattacgaatgcctgtgcggcaagtacaagcggatgaaattc
cgtggcatcatctgcgaaaaatgcggtgtggaagtcacgctggcgaaggtccgccgcgag
cgtatgggccatatcgagcttgccagccccgttgcccatatctggttcctcaaatctctg
cccagccgtatcggcctgatggtcgacatgacgctgaaggatctggaaaagatcctgtat
ttcgagagctacgtggttctggaacccggcacgtcgccgctcaagcagtacagcctgctg
acggaagaccagtacctggatgtcatggacgagcatggtgacgaagggatcgaggtcggg
atcggtgcggaagcgatcaagaagatccttgagcgcatcgactgccgtcaggaaaaggaa
gaactgcgtcaggagcttaaggacaccacgtccgaagccaagcgcaagaagctggtcaag
cgcctgaagctggtcgaagcctttgccgatagtgaatcgcgcccggaatggatgatcctg
gaactggtaccggtcatcccgcccgagttgcgcccgctggtgccgcttgacggtggccgc
ttcgccacgtccgacctgaatgacctgtaccgtcgtgtcatcaaccgtaacaaccgcctt
aagcggctgatcgagctgcgtgcgccggacatcatcgtccgtaacgaaaagcgcatgctc
caggaatcggtcgatgcgctgttcgataacggtcgtcgcggtcgtgccatcacgggggct
aacaagcgtccgctgaagtcgctgtccgacatgcttaagggcaagcagggccgcttccgt
cagaacctgctgggcaagcgcgttgactattcgggtcgttcagtcatcgtggttggcccg
gagctgaagctgcaccagtgcggcctgcccaagaagatggcgctggaactgttcaagcct
ttcatttactccaagctggaaaaatacggtcacgccaccaccatcaaagctgccaagcgt
atggtggaaaaggaacgtcccgaggtgtgggatatccttgaagaggtgatccgcgagcat
cctgtcatgctcaaccgtgcgccgacgctgcaccgtctgggcatccaggcgttcgagccg
gtcctgatcgaaggcaaggcgattcagctgcacccgctggtctgcaccgcgttcaacgcg
gactttgatggtgaccagatggctgtgcacgttccgctgagcctcgaggcacagctggaa
gcacgcgtgctgatgatgtccaccaacaacatcctcagccccgccaacggcaagcccatc
atcgtgccgtcacaggacatcgtgctggggctgtactacctcagcctcgagacgcctgaa
ttccgtgcgaccccggaccagaacagctacgacgacaaaggtcatcccacggtaacgggc
gcaccttccttctccagcgttggagaagtggaatatgcgctcagcaccggtgcggtgaag
ctgcatgacaagatccgcgcacgggttgatatgcttgatgctgatggcaagcccgtgcgt
gaaacggttgtcacgacgcccggtcgcatgctggttgcccagattctgccccgccatgcg
gcactgccgtttgcgctgatcaaccgccagttgaccaagaagatcgtgtcggacgtgatt
gatgcggtctaccgtcactgcggtcagaaagagtgcgtgattttctgtgaccgcctgatg
ggccttggtttccgccatgcggcgaagtcgggcatttccttcggcaaggacgacatgatc
gtcccgaccgagaagaaggaactggttgatcgcacagcagcggaagtgaaggagttcgaa
cagcagtatcaggacggtctgatcacggctggcgagcgttacaacaaggtggtcgatgcc
tggtcgcgctgcacggacgaagtgcaggccgcgatgatgaaggagatttccaagcaggaa
atcggcaagccgaccaactcggtgtggatgatgagccattccggtgctcgtgggtcgcca
gcacagatgaagcagctggccggcatgcgtggcctgatggccaagccgtcgggtgagatc
attgaacagccgatcatcgccaactttaaggaaggcctgtcggttctcgattactttacc
tccagccatggtgcgcgtaagggcctggccgatactgcactcaagacggcgaactccggt
tacctgacccgccgtctggtcgacgtggcgcaggacagcatcatcgtcgaggaagattgc
ggcaccgagcgcggcctgacggtgcgtgcggtgatggatggcggtgaggtcatcgcgtcc
ctgtccgagcgtatgctgggccgcacgctggccgcagatgtgctggatccggcaacaggc
aaggtgctgttcccgcgcaatacgctgattgaagaagcccaggccgagcagatcgagaag
gctggcgtagaaagcctgctgatccgctccgtgctgacctgtgacagccgtgttggcgtg
tgtggccattgctatggccgtgaccttgcacgcggcacaccggtcaatatcggtgaggcc
gtgggcgttatcgccgcgcagtccattggtgagcccggcacgcagctgaccatgcgtacc
ttccatatcggtggtgcggcgcagcgtggcgccgagcagtcgatggttgaagcatcgcgt
gatggtcaggtgacgatccgtaacaagaacgtggtccataacagtcagaacgtgcccatc
gtcatgtcgcgtaactgcgagatcctgctgacggatgaccgtggtaccgaacgggcccgt
taccgtgtgccttatggtgcacgtctgctggtcgaggatggcgctgcagtgacccgtggc
cagaaaatggccgagtgggacccgtacaccctgccgatcatcaccgagcagcccggtaag
gtggaatacctcgacctgatcgactccatcaccctggtggagcggatggatgaggtgacc
ggtctgacatcgaaggtggtggttgactacaagcaggcttccaaggggatcgatctgcgg
ccacgcctgcagcttaaagatgccaatggcgatgtggtgaagctggcgaacggtaacgac
gcccgctacttcctttcacctgactcgctgctgtcggtcgagaacggcgcacaggtaaat
gcgggtgacgtgctggcgcgtatcccgcgtgaaggttccaagacgcgtgacattaccggt
ggtctgccgcgcgtggcggaactgttcgaggcccgtaagcccaaggatcacgccattatc
tcggaaaccgaggggcgcgtagagttcggcaaggattacaagtccaagcgccgtgtcatc
gtgaagaacgacgaaacgggcgaggagacggattacctgatccccaagggcaagcatgtg
tccgtgcaggaaggcgacttcgtgcaggtgggcgatccgctggtcgatggcccccgtgta
ccgcatgacatcctgaaggttctgggtgtcgaggcactgtcggactatctggtcaacgaa
atccaggacgtctaccgactgcagggcgtgaagatcaatgacaagcatatcgaagtcatt
gtgcgtcagatgctgcagaaggtggaaatccttgaaccgggcgatacgacctacctgatt
ggtgagacggtggaccgtatcgagtatgaggaagagaacaccaagcgcctgaacatgggc
gagcgtccggctgctgccatgcctgtactgcagggcatcaccaaggcctcgctgcagacg
cagtccttcatctccgcggcatccttccaggagaccacacgtgtcctgaccgaggctgcc
acggcagggaagaaggatacgctcaacggcctgaaggagaacgtgattgtcggccgtctg
atcccggcagggacgggtagcgtgatgaacaagctccgggctgttgcagcgggtgaggac
aagcagcgccttgcccaggcgcgctctacggtggccacgaccaaggctgccgaataa
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