Komagataeibacter medellinensis: GLX_13980
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Entry
GLX_13980 CDS
T01631
Name
(GenBank) nuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gxy
Komagataeibacter medellinensis
Brite
KEGG Orthology (KO) [BR:
gxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gxy03400
]
GLX_13980
Enzymes [BR:
gxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLX_13980
DNA repair and recombination proteins [BR:
gxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GLX_13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BAK83810
UniProt:
G2I6R3
LinkDB
All DBs
Position
complement(1604657..1607707)
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AA seq
1016 aa
AA seq
DB search
MTGSRERPCPRGRVAMVPSHVPFVDQIAARWLEQARHDPQASGTGLILLPSRRAARALTE
AFVRQVDGRPILLPRIAPIAALDEAALALSGRNALDLPPAVDPVRRLATLSLLVMQAGRA
FGDVQGVDQAWPLARALADLMDEAEWAECDLRERLPHAAEGDFAQHWHQTLRFLSIVTSV
WPAWLEEQGVMNPVARQAALLHAQAERWEDHPPPPGTPIWAAGFADAVPSTIAMLRAVLS
LPDGLLVLPGVDMACAGAVWQRLPPDHPQAGTARMLAELGIGRESMEQWDSLPPGCNASS
PASRAGLLARALLPAHALEQWRAPDAPVAADGLSVLRSTDQQEEAAAIAMVLRQVLERPG
QRAALVTPDRALAGRVATELVRWGVIADDSAGESLLAIPQTAFLRLIVQAVDGGLGPVAL
LSVIKHPLAACGLTPGNCRASARQLERLVLRGPAPPPGITGLRRALVRAADDPHGAMADA
PDAPEEINAFLTRLETAFGPLLSLPRSALVPVSTLLSALVEVAQNLATTDTADGAERLWA
GEEGNALGQHMSAMLAWCDVLPDARLGALDGLLASSLAGMSVQGRRALRGRSGTVHPRVF
IWGLLEARLQTADLIVLGGLAETVWPPATDPGPWMSRPMRTRVGLPLPEWAIGQAAHDFV
SCACAAPQVVLSVAGRRQGAPTVPARWLVRLDAYLAGHGHALPAHPALRWLDSLDRPEGA
ATPVAPPQPRPVVGLRPRSLSVTEIETWMRDPYAIYARRILKLNRLADLEEQADAADYGQ
IVHAALERWFHAHPADWPADGAVQMQAVFADVLREADLRPALAAWWGPRLERIATWCART
EQARRTTGGPRTVLTELTGRMVLTDLPGGPFTLRGRADRIDLYGEGSLSLFDYKTGTLPL
RRSVIEGWQSQLVLEAAMIESGGFPPPVAGNVAELVYWRLTGGHVPAQVLDVARGAELSD
LIARCRDGLRTLVAAYDSPDQPYLSHPWPGEEPRFADYAHLARVAEWSAAREETAG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaagccgggaacgtccctgcccacgggggcgcgtggccatggtgccgtcacat
gtgccctttgtggaccagatcgcggcccgttggcttgaacaggccaggcatgacccgcag
gccagcggcaccggcctgatcctgctgcccagccgccgtgccgcccgcgccctgaccgag
gcgttcgtgcgccaggtcgatggccgccccatcctgctgccccgtattgccccgattgcc
gcccttgatgaggcagcgcttgccctgtctggccgcaatgcgcttgatctgccgccagcg
gtggacccggtgcggcggctggctacgctcagcctgctggtcatgcaggcgggacgtgcg
tttggcgatgtgcagggcgtggatcaggcctggccgctggcgcgcgcgctggcagacctg
atggatgaggccgaatgggccgaatgcgacctgcgcgaacgcctgccccatgcggcggaa
ggtgattttgcccagcactggcaccagacgctcaggttcctctccatcgtgaccagcgtg
tggcctgcatggctggaggaacagggagtgatgaaccccgtggcccggcaggccgcactg
ctgcacgcgcaggcagaacggtgggaagatcatcccccgccgccgggcacccccatatgg
gccgccggttttgccgatgccgtgccttcgaccatcgccatgctgcgtgccgtgttgtcc
ctgcccgacgggctgctggtcctgcccggtgtggatatggcctgtgccggggcggtatgg
cagcgcctgccgcctgaccatccgcaggctggtaccgcccgcatgctggctgaactgggt
atcgggcgtgaaagcatggaacagtgggacagcctgccccccggctgcaacgccagcagc
ccggcctcgcgcgcgggcctgctggcgcgcgcgctcctgcctgcccatgcgctggaacag
tggcgcgcgcccgatgcgccggtggcggccgatggtctgtcggtgctgcgcagcaccgac
caacaggaggaagccgccgccatcgccatggtgctgcggcaggtcctcgaacggcctggc
cagcgtgcggcccttgtcacccccgaccgggcgctggccgggcgcgtggcgacggaactg
gtgcgctggggcgtgattgccgatgacagcgcgggtgaaagcctgctggccataccgcag
accgcctttttgcgcctgatcgtgcaggcggttgatggtggccttgggccggttgcactc
ctgtccgtcatcaagcacccgctggcggcgtgtggcctgacaccgggcaactgccgcgcc
agtgcccgccagctggagcggctggtcctgcgtggcccggcccccccgcccggtattacg
gggctgcgtcgcgcgctggtgcgggccgcagacgacccccatggcgccatggccgacgca
cctgatgcaccggaggagatcaatgccttcctgacccggttggagactgccttcggtccc
cttctgtccctgccgcgcagtgcgctggtgccggtttccaccctgctttccgcgctggtc
gaggttgcgcagaaccttgccaccacggatacggccgatggcgccgagcgcctatgggcg
ggtgaggaaggcaatgcgctgggtcagcacatgagtgcgatgctggcctggtgcgatgtg
ctgcccgatgcccggctgggcgcgctggatggtctgctggcctcctcgcttgcgggtatg
agcgtgcaggggcgcagggcgctgcgcgggcgctcgggcacggtccacccgcgcgtgttc
atctggggcctgctggaagcccggctacagacggcagacctgatcgtgctgggcggcctg
gccgaaaccgtatggccccccgccaccgatccggggccatggatgagccgccccatgcgc
acgcgcgtgggcctgcccctgccagaatgggcgatcgggcaggcggcgcatgacttcgtc
tcctgtgcgtgtgcggcaccacaggtcgtgctgtcggtagcagggcggcggcagggtgcg
cctacggtgcccgcgcgctggctggtgcggctggatgcctatctggccgggcatggccac
gcgctgcccgcccatcccgccctgcgctggctggacagccttgaccggcccgagggcgcg
gccactccggttgcccccccacagccgcggcctgtggttggcctgcgcccgcgcagcctg
tcggtgaccgagatcgagacatggatgcgtgatccttacgccatttatgcgcggcggatc
ctgaagctgaacaggctggcggatctggaggaacaggccgatgccgccgattacggccag
atcgtgcatgcggcccttgaacgctggttccatgcccatcctgctgactggcccgccgat
ggtgccgtgcagatgcaggcggtctttgccgatgtgctgcgtgaagccgacctgcgcccg
gcccttgccgcatggtgggggccacggctggagcggattgccacatggtgcgcccggacc
gagcaggcgcgccgcaccactggcggtccgcgcacggtgctgacggagcttacgggtcgg
atggtgctgaccgaccttcccggcggcccctttaccctgcgcgggcgggctgaccgcatt
gacctgtatggtgagggcagtctgagcctattcgattacaagaccggcaccctgccattg
cggcgcagcgtgatcgagggctggcagtcccaactggtgctggaggccgcaatgattgaa
agtggtggtttcccaccccccgtggcgggcaatgtggcggaactggtgtactggcggttg
accggcggccatgtgccggcccaggtgctggacgtggcgcgcggggccgaactgagcgac
ctgatcgcgcgctgtcgtgatgggctgcgcacccttgttgcggcctatgacagccctgac
cagccttatctgtcccatccatggcccggcgaggaaccgcgctttgccgattatgcccac
ctggcccgggtggcggaatggagcgccgcacgcgaggagaccgccggatga
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