Komagataeibacter medellinensis: GLX_16440
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Entry
GLX_16440 CDS
T01631
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gxy
Komagataeibacter medellinensis
Pathway
gxy03030
DNA replication
gxy03410
Base excision repair
gxy03420
Nucleotide excision repair
gxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLX_16440
03410 Base excision repair
GLX_16440
03420 Nucleotide excision repair
GLX_16440
03440 Homologous recombination
GLX_16440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gxy03032
]
GLX_16440
03400 DNA repair and recombination proteins [BR:
gxy03400
]
GLX_16440
Enzymes [BR:
gxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GLX_16440
DNA replication proteins [BR:
gxy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GLX_16440
DNA repair and recombination proteins [BR:
gxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GLX_16440
NER (nucleotide excision repair)
GGR (global genome repair) factors
GLX_16440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAK84056
UniProt:
G2I7F9
LinkDB
All DBs
Position
complement(1845524..1848298)
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AA seq
924 aa
AA seq
DB search
MSSDKQVHLILVDGSGFIFRAFHALPSMTSPDGTPVNAVYGFSNMLSRLLREHAGTHLAV
IFDAGRHTFRNDLYGEYKSHRPEPPEELRPQFSLVRDATAAFGVPALEEAGWEADDLIAA
YARKVTNAGGQCTIYSSDKDLMQLIRPGVMMMDPIKNRPIGPKEVEAKFGVAPDRVAQVQ
ALIGDPVDNVPGVPGIGPKTASALMAEYGSLDAILAGAESMKASKRRDNLLAHADMARLS
LQLVTLREDAPCPEPLSDLACCDVDMERLGAWLSDMGFSSLLQRMGLKAKPRPRISAHVT
PEGLSQPESELPPIPPEPYGGYETVTDPAVLREWVEQARTSGVCAVDTETDGLDPLTAPL
IGISLAPHCGRACYIPLGHQVDLMDSPGTPQMPVKTALEILEPLFADPSVLKVFQNAKFD
LLVLTQAGSVQPTPIDDTMLISYAQSAGKHGQGMDELSRLTLDHTPIPYDEVTGTGRNRV
VFSRVDIARATPYAAEDADVTLRLWQMLKPRLRTNHALALYEEMERPLVPILADMERAGI
AVDANDLRAMSTEFAQRMGVIEAEIHKLAGRDFNVGSPKQLGEILFDEMGLPGGKRTKAG
AWGTDSSVLQDLADQGHDLPERILAWRQLAKLKSTYADALLNQINPATGRVHTSFQMAVT
TTGRLSSNDPNLQNIPIRTEEGGRIRRAFVAAPGNVLVSADYSQIELRLLADVADIPALR
EAFELGQDIHARTASEVFGIPLEGMDPLTRRRAKAINFGIIYGISAFGLGRQLGIPPGEA
RGYIDAYFARYPGIRDYMERVKAQARAKGYVTTPFGRRCWVPGIGDKSAMRRNYAERQAI
NAPLQGGAADIIKRAMVRIPTALADAGLDGRMLLQVHDELVFEVRKDDADRLAALVRQVM
ESAATLSVPLVVETGTGTNWADAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgacaagcaggttcacctgatcctggtggatggttcgggcttcattttccgc
gccttccacgcactgccctccatgaccagccccgacggcacgcccgtcaatgcggtttat
ggtttttcgaacatgctgtcgcgcctgctgcgcgaacatgcaggtacccatctggcggtc
atattcgatgcgggacgccatactttccgcaatgacctgtatggcgaatacaagtcccat
cgtcccgaaccgccggaagaactccgcccgcagttcagcctcgtgcgcgatgcgaccgcc
gctttcggcgtgccagcgctggaggaagcgggatgggaagccgatgacctgatcgcagcc
tatgcccgcaaggtgaccaatgcgggcggacagtgcaccatctattcatctgataaggat
ctcatgcagctcatccgccccggcgtgatgatgatggacccgatcaagaaccgcccgatc
ggacccaaggaggtcgaggccaagtttggtgtagccccggatcgggtggcgcaggtacag
gccctgattggcgacccggtagacaacgtgcccggcgtgccgggcatcggccccaagacc
gcatcggcgctgatggcggaatacgggtcgctggacgccatactggccggggccgagagc
atgaaggcgtccaagcggcgcgacaacctgctggcccatgccgacatggcgcgcctgtcg
ctgcaactggtcacactgcgtgaggacgcgccgtgccccgaaccgctgtccgatcttgcc
tgctgcgatgtggacatggagcgtctgggcgcatggctgtcggatatggggttttcatcg
ctgctgcagcgtatgggcctcaaggcgaagccacgcccgcgtatttccgcccatgttaca
cctgaagggctcagtcagcctgagagcgaactgccccccattccgcccgaaccctatggt
ggttacgaaacggtgaccgaccccgcagtgctgcgtgaatgggtggaacaggcccgcacc
agcggcgtgtgtgcggtggatacggaaacagacgggctggacccgctcaccgccccgctg
atcggcatatcactcgccccgcactgtggccgcgcgtgctatatcccgcttggtcatcag
gtggatctgatggacagccctggcacgccccagatgccggtgaaaaccgcgctggaaatc
cttgaaccgctatttgccgacccgtcggtgctcaaggtgttccagaacgccaagttcgac
ctgctggtactgacacaggcaggcagcgtccagcccacgccgattgatgacaccatgctg
atttcctacgcccagtcggcgggcaagcatgggcaggggatggatgagctttcgcgcctc
acgctcgaccacacacccattccttatgacgaggtcacgggcacgggccgcaaccgggtg
gtgttctccagggtcgatatcgcgcgcgccacgccctatgcggcagaggatgcggatgtc
accctgcggctgtggcagatgctgaaaccccggctgcgtaccaaccacgcgctggcgctg
tatgaggaaatggagcgcccgctggtaccgatcctggcggatatggaacgggctggcatt
gcggtcgatgccaatgacctgcgcgccatgtccaccgaattcgcgcagcgcatgggcgtg
atcgaggccgagatccacaagctggccgggcgtgacttcaatgtcggttcccccaagcag
ttgggcgagatcctgttcgatgaaatgggcctgcccggtggcaagcgcaccaaggcgggg
gcatggggcacggattcatcggtattgcaggacctggcggatcaggggcacgacctgccc
gagcggattctggcgtggcggcagttggccaagctgaaaagcacttatgccgatgcgctg
ctcaaccagatcaacccggcaacgggacgggtgcatacatcgttccagatggcggtaacg
acaacgggccgcctgtcatcaaatgatcccaacctgcagaacatccccatccgcacggaa
gaaggcgggcgcatccgccgggcctttgtcgcggcccccgggaatgtgctggtctcggct
gactattcccagatcgaactgcggcttctggcggatgtggcggatattcccgcattgcgt
gaggcgtttgaactggggcaggacattcatgcccgcacggcgtccgaagtgttcggtatc
ccgcttgaaggcatggacccgctgacacgcaggcgggccaaggccatcaactttggcatc
atctatggcatcagcgccttcgggctggggcgccagcttggcattccgcccggtgaggcg
cgtggttacattgacgcctatttcgcccgttaccctggcatccgcgactacatggaacgg
gtgaaggcgcaggcgcgggcgaagggatatgtcaccacgccattcggccgccgctgctgg
gtaccgggcattggtgataaaagcgccatgcgccgcaattatgccgaacgccaggccatc
aacgccccgttgcaggggggcgctgccgatatcatcaaacgcgccatggtgcgaattccc
acggcccttgcggatgcggggcttgacggacgcatgctccttcaggtccatgacgaactt
gtgttcgaggtgcgcaaggatgatgctgatcgtctggcagccctcgtcaggcaggtcatg
gaatccgcagccaccctttcggtgccgctggtcgtggaaaccgggaccggaacgaattgg
gcggatgcacattga
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