Komagataeibacter medellinensis: GLX_18850
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Entry
GLX_18850 CDS
T01631
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gxy
Komagataeibacter medellinensis
Pathway
gxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLX_18850 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gxy03021
]
GLX_18850 (rho)
03019 Messenger RNA biogenesis [BR:
gxy03019
]
GLX_18850 (rho)
Transcription machinery [BR:
gxy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GLX_18850 (rho)
Messenger RNA biogenesis [BR:
gxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GLX_18850 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
NACHT
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
BAK84297
LinkDB
All DBs
Position
2099238..2100548
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AA seq
436 aa
AA seq
DB search
MQLAELKAKSPADLLAYAESLNIENASSLRKQELMFTILKTLADNDQAIYGDGTLEILSD
GFGFLRSPEANYLPGPDDIYISPSQVRRFGLRTGDTVEGQIRAPRDGERYFALLKVNAIN
FEPPEAVRQRINFDNLTPLYPERRLKMEVENSAIGGADEALTNGKGKGKTPNRDFTSRVI
DLVSPIGMGQRALIVAPPRTGKTVMLQSIASSISANHPEVFLIVLLIDERPEEVTDMARS
VRGEVVSSTFDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSG
KVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSE
LILDRKLADKRTFPAIDITKSGTRKEELLVDRADLAKMWVLRRILAPMGTMDAMDFLLDK
LKYSKTNHDFFDAMNT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgccgaactcaaggccaaatctcctgcagaccttttagcctacgctgaaagt
ctgaacattgaaaacgcatcatctcttcgcaagcaggagctgatgttcacgatcctcaag
accctggctgataatgatcaggcgatctacggggacggcacgctcgaaatcctgtccgac
ggtttcggttttctccgctcgccggaagccaattacctgcccggaccggatgacatctac
atttctcccagtcaggtccgtcgttttggtctgcgcaccggtgatacggtggaaggccag
atccgcgctccgcgtgatggcgagcggtattttgctctgctcaaggtcaatgcgatcaat
ttcgagccgcccgaggcggtgcgccagcgcattaattttgacaacctgaccccgctttat
ccggaacgccggttgaagatggaagtcgagaactcggctattggtggtgcggacgaagcc
ctcactaatggcaaggggaagggcaagacgcctaaccgggatttcacgtcgcgtgtgatc
gatctggtctcgcccatcggcatgggccagcgtgcgctgatcgttgccccgccgcgtacc
ggcaagacggtgatgctgcagagcatcgcctcctctatttccgccaatcatcccgaagtt
tttttaattgtgctgttgattgatgagcgcccggaagaagtgacggatatggcccgctcc
gtgcggggggaagtggtgtcctccacctttgatgagcccgcgacccgccacgtgcaggta
acggaaatggttctggaaaaagccaagcgtctggtcgaacacaagcgtgacgttgtgatt
ttgcttgattcgattacgcgtctggcacgtgcttacaacaccgttgtgccctcatcgggt
aaggtgctgaccggtggtgtggatgccaatgcgctgcaacgccccaagcgcttcttcggt
gcagcccgtaatatcgaggaaggcggctcattgaccatcatcgccaccgccctgatcgac
accggtagccgtatggatgaggtcatctttgaagagttcaagggcacgggtaactccgaa
ctgatccttgaccgcaagctggctgacaagcggacgttccccgccatcgacatcaccaag
agcggcacccgtaaggaagaactgctggttgatcgtgccgatctggccaagatgtgggtc
cttcgtcgtatccttgcgcccatgggcacgatggatgcgatggacttcctgctcgacaag
ctcaaatacagcaagaccaaccacgacttctttgatgcgatgaacacctga
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