Komagataeibacter medellinensis: GLX_27060
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Entry
GLX_27060 CDS
T01631
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gxy
Komagataeibacter medellinensis
Pathway
gxy03420
Nucleotide excision repair
gxy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GLX_27060
03430 Mismatch repair
GLX_27060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gxy03400
]
GLX_27060
Enzymes [BR:
gxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLX_27060
DNA repair and recombination proteins [BR:
gxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GLX_27060
MMR (mismatch excision repair)
Other MMR factors
GLX_27060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
AAA_16
AAA_22
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
BAK85118
UniProt:
G2I3F1
LinkDB
All DBs
Position
complement(3005834..3008044)
Genome browser
AA seq
736 aa
AA seq
DB search
MDSLIPTGQVPDYLNRLNPEQRDAIETTDGPLLVLAGAGTGKTRVLTTRFAHILLSGRAR
PNQILAVTFTNKAAREMRERVSALLGESAEGLWLGTFHALCARMLRRHAEYVELTSSFTI
LDTDDQLRLLKQLLEPYHIDTKRWPPQAIMGVIQRWKDRGLMPDAITAAEDTDFANGRCT
EIYADYQQRLKQINACDFGDLMLHMTEILRKHPDVLAQYHRFFRYILVDEYQDTNTIQYL
WLRLLAHRGTQRANICCVGDDDQSIYSWRGAEVENILRFERDFPGAKVVRLERNYRSTRQ
ILGAASGLIAHNEERLGKTLHPGREDAEGEKVRVISVQDSDDEARMVGTEIERLRADGHP
MSEIAILVRAGFQTRAFEERLITLGLPYRVVGGLRFYERAEIRDAIAYMRVVSQPSDDLA
FERIINVPRRGVGTTGLQKMHMHARERQIPLTAAVLEMLGAGDIKGRAKEQLAALMQSIA
TTREMLGREGHVVAIDHLLEESGYIDMWKADKSPDAPGRLENLKELVRSLADYENLGGFL
EHVALVMDAEDRSGADSMSIMTLHGAKGLEFDTVFLPGWEEGVFPSQRTLDEGGLKGLEE
ERRLAYVGITRARKLAIISHAANRLIYGSWQSAIPSRFVEELPAEHVETRGDTANNRRTF
LGRPAVFGSTPFPLVASKRVHDVTPTPARSGMNVGVRVFHQKFGYGTITSVEGNRLEVAF
EKAGPKRVIDTFVEQV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggacagccttatcccaaccggccaggtgccggactacctgaaccgactcaatcccgaa
cagcgggacgcgatcgagaccacggatggtccgctgctggtccttgctggcgcgggcacg
ggcaagacgcgggtgctgaccacacggttcgcacatatcctgctatcgggccgggcacgg
cccaaccagatccttgccgtaaccttcaccaacaaggccgcgcgcgaaatgcgcgagcgt
gtcagcgcgctgctgggggagtcggccgaagggctatggctgggcacgttccatgccctg
tgcgcacgcatgctgcgccgccatgcggaatatgtggagcttaccagcagcttcaccatc
cttgataccgatgaccagttgcgcctgctcaagcagttgcttgaaccctaccacatcgac
accaaacgctggccaccacaggcgatcatgggcgtgatccagcgatggaaggaccgcggg
ctgatgcccgatgccattacggcagccgaggatacggacttcgccaatggccgctgcacc
gagatctatgccgattaccagcagcgcctgaagcagatcaacgcctgcgattttggcgac
ctgatgctgcacatgaccgaaatcctgcgcaaacaccctgatgtactggcgcagtatcat
cgcttcttccgctatatcctggtggatgaataccaagataccaacaccatccaatacctg
tggctgcggctgctggcacaccggggcacgcagcgtgcgaacatctgctgcgtgggtgat
gatgaccagtcgatctattcctggcgcggggcggaagtggaaaacatcctgcgctttgaa
cgcgacttccccggtgcgaaggtggtccggctggaacgcaattaccgttccacccggcag
atcctgggcgctgcatcgggcctgatcgcgcataacgaggaacgcctgggcaagacgctg
caccccggccgcgaggatgcggaaggcgaaaaggtgcgcgtcatttccgtgcaggattcg
gatgacgaggcccgcatggtcggcaccgagatcgaacgcctgcgtgccgatggccacccg
atgagcgaaattgccatccttgtccgcgcagggttccagacccgcgcgtttgaagaacgg
ctgatcacccttggcttaccctaccgtgtggtcggcggcctgcgcttttacgaacgcgcc
gaaatccgcgatgccatcgcctacatgcgggtggtcagccagccatccgatgatctggcg
tttgaacgcatcataaacgtgccgcgccggggcgtaggcaccacgggcctgcagaaaatg
cacatgcacgcccgcgaacgccagatacccctgaccgctgccgtgctggaaatgctgggg
gcgggcgacatcaagggccgggcaaaggaacagcttgccgccctgatgcaaagcatcgcc
accacgcgtgagatgctgggccgcgaggggcatgtcgtcgccattgaccacctgctggag
gaaagcgggtatatcgacatgtggaaggccgacaaatcccctgatgcaccgggtcggctt
gagaacctgaaggaactggtccgctcactggcggattacgagaaccttggcgggttcctt
gagcacgtcgccctcgtcatggatgccgaggaccgctcgggggccgacagcatgagcatc
atgacgctgcatggcgccaaggggctggagttcgacaccgtgttcctaccgggatgggag
gaaggggtcttcccatcccagcgcacgctggatgaaggcggcctgaagggattggaggaa
gaacgccgcctggcctatgtcggcattacgcgggcacggaaactggcgatcataagccat
gccgccaaccgcctcatatacggcagttggcagtccgccattcccagccgttttgtggag
gaactgcccgccgagcatgtcgagacacgcggtgatacagccaacaacaggcgcaccttc
cttggccgccccgccgtgtttggcagcacgccattcccgctggtggcatcaaagcgcgtg
catgacgtaacccccaccccggcccggtcgggcatgaatgtgggggtgcgtgtattccac
cagaaattcggctacggcacgattacctcggtcgagggaaaccggctggaagtcgcgttt
gaaaaagcaggccccaagcgggtgatcgatacatttgttgagcaggtataa
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