Geobacillus sp. Y412MC52: GYMC52_2765
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Entry
GYMC52_2765 CDS
T01399
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gya
Geobacillus sp. Y412MC52
Pathway
gya03030
DNA replication
gya03410
Base excision repair
gya03420
Nucleotide excision repair
gya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYMC52_2765
03410 Base excision repair
GYMC52_2765
03420 Nucleotide excision repair
GYMC52_2765
03440 Homologous recombination
GYMC52_2765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gya03032
]
GYMC52_2765
03400 DNA repair and recombination proteins [BR:
gya03400
]
GYMC52_2765
Enzymes [BR:
gya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYMC52_2765
DNA replication proteins [BR:
gya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GYMC52_2765
DNA repair and recombination proteins [BR:
gya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GYMC52_2765
NER (nucleotide excision repair)
GGR (global genome repair) factors
GYMC52_2765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
WHD_BrxR
HHH_2
Enkurin
XPG_I
Motif
Other DBs
NCBI-ProteinID:
ADU95142
LinkDB
All DBs
Position
complement(2818983..2821613)
Genome browser
AA seq
876 aa
AA seq
DB search
MKKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAFDA
GKTTFRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLAAR
AEQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPETVREKYGLTPEQIVDLK
GLMGDKSDNIPGVPGIGEKTAVKLLRQFGTVENVLASIDEIKGEKLKETLRQHREMALLS
KKLAAIRRDAPVELSLDDIAYQGEDREKVVALFKELGFQSFLEKMESPSSEEEKPLAKMA
FTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAW
LGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYE
AVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWALERPFLDELRRNEQDRLLVELEQP
LSSILAEMEFAGVKVDTKRLEQMGEELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFE
KLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTK
KVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELR
VLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYG
LAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRN
FNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPKEE
MERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaaagcttgttttaatcgacggcagcagcgtggcgtaccgcgccttttttgcc
ttgccgcttttgcataacgacaaaggcatccatacgaacgccgtctacgggtttacgatg
atgttgaataaaattttggcggaagaagagccaactcatatgcttgtcgcgtttgacgcc
gggaaaacgacgttccggcatgaagcgtttcaagagtataaaggtgggcgccagcagacg
ccaccggagctgtcggagcagtttccgctgttgcgcgagctgctgagggcgtatcgcatc
cccgcctatgaactcgagaactacgaagcggacgatattatcggaacgcttgccgcccgc
gctgagcaggaagggtttgaggtgaaagtcatttccggcgaccgcgatctgacccagctc
gcctccccccatgtgacggtggacattacgaaaaaagggattaccgatatcgaaccatac
acgccggagacggtccgcgaaaaatacggcttaactccggaacaaatcgttgatttgaaa
ggattgatgggcgacaaatcggacaacatccccggagtgccgggcatcggggaaaagacg
gcggtcaagctgctcaggcaattcggcacggtcgaaaatgtgcttgcctccattgacgag
atcaaaggcgaaaagttgaaagaaacgctgcgccaacaccgggagatggcgctgttaagc
aaaaagctcgccgccattcgccgcgacgccccggtcgagctctcgcttgatgacatcgcc
tatcaaggggaagaccgggagaaagtggtcgctttatttaaagagcttgggtttcaatcg
tttttagagaaaatggaatcgccgtcatcagaagaggaaaaaccgcttgccaagatggca
tttacgcttgctgaccgcgtgacggaggagatgcttgccgacaaggcggcgcttgtcgtt
gaagtggtcgaggaaaattatcatgatgcgccgatcgtcggcatcgctgtggtcaacgaa
catggacggtttttcctgcgcccggagacggcgcttgccgatccgcagtttgtcgcctgg
cttggtgatgaaacgaagaaaaaaagcatgtttgactcaaagcgcgcggcagtcgccttg
aaatggaaaggaattgagctatgcggcgtttcctttgatttattgctggccgcctatttg
cttgatccggcgcaaggtgttgatgatgtggctgccgcagcaaaaatgaagcaatacgaa
gcggtgcgcccggatgaagcggtgtatggcaaaggggcgaagcgggccgtgccggatgag
ccagtgctagccgagcatttggtccgcaaggcggcggcgatttgggcgctcgaacggccg
tttttggatgagctgcgccgcaacgaacaagatcggttgctcgtcgagctcgagcagccg
ttgtcttcgattttggcggaaatggaatttgccggagtgaaagtggatacgaagcggctc
gaacagatgggcgaagagctcgccgagcagctcggcacggtcgagcagcgcatttatgag
ctcgccggccaagaattcaacatcaattcaccgaaacagctcggcgtcattttatttgaa
aaactgcagctgcccgtcttgaaaaaaacgaaaactggctactccacttcggcggatgtg
cttgaaaaacttgcgccttatcacgagatcgtggaaaacattttgcattaccgccagctt
ggcaagttgcagtcgacgtatattgaaggattgctgaaagtcgtgcgacccgatacaaag
aaggtgcatacgattttcaatcaggcgttgacgcaaaccggacggctcagctcgacggag
ccgaacttgcaaaacattccgattcggcttgaggaaggacggaaaatccgccaagcgttc
gtgccatcggagtctgattggctcattttcgccgccgactactcgcaaattgagttgcgc
gtcctcgcccatattgcggaagatgacaatttaatggaagcgttccgccgcgatttggat
atccatacgaaaacagcgatggacattttccaagtgagcgaggacgaagtgacgcccaac
atgcgccgtcaggcgaaggcggtcaactttgggatcgtttacgggatcagtgattacggc
ttggcgcaaaacttaaatatttcgcgcaaagaggcggctgaattcatcgagcgctacttc
gaaagcttccctggcgtgaagcggtatatggaaaacattgtgcaagaagcaaaacagaaa
gggtatgtgacgacgctgctgcatcggcgccgctatttgccggatatcacgagccgcaac
ttcaacgtccgcagttttgctgaacggatggcgatgaacacgccgattcaagggagcgcc
gctgacattattaaaaaggcgatgatcgatctgaacgccagactgaaggaagagcggctg
caagcgcgccttttgctgcaggtgcatgacgagctcattttggaggcgccgaaagaagag
atggagcggctgtgccggctcgttccggaagtgatggagcaagcggtcacacttcgcgtg
ccgctcaaagtcgattaccattatggctcgacgtggtatgatgcgaaataa
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