Geobacillus sp. Y412MC52: GYMC52_2779
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Entry
GYMC52_2779 CDS
T01399
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gya
Geobacillus sp. Y412MC52
Pathway
gya03030
DNA replication
gya03430
Mismatch repair
gya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYMC52_2779
03430 Mismatch repair
GYMC52_2779
03440 Homologous recombination
GYMC52_2779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gya03032
]
GYMC52_2779
03400 DNA repair and recombination proteins [BR:
gya03400
]
GYMC52_2779
Enzymes [BR:
gya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYMC52_2779
DNA replication proteins [BR:
gya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GYMC52_2779
DNA repair and recombination proteins [BR:
gya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GYMC52_2779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
ADU95156
UniProt:
A0A0E0TEU7
LinkDB
All DBs
Position
complement(2836060..2839338)
Genome browser
AA seq
1092 aa
AA seq
DB search
MFVHLHVLSGYSLFQSAAAVEALAARAKQLGYQALALTDRNVLYGAIPFYRECKQNGIRP
IIGVTADVALSGEEAFPLVLLAANEEGYRHLLEISTMMQMGETKHMEEAALVRLSGGIIA
ITPGSEGRVESLVAAGEWERAKEALGRYHQLFPGRLYVAVQRGEQTRAPYEAGLLQLAEE
TGVPIVATNDVRYVERSDAVAWRCLQAIGRGALLADIEDDNGRYLAGPEEMARRFADLPE
ALENSLAIADQCELQIEFGGWRLPAYPVPDGETADSYLRRLSEQGLARRVPSADERYWRR
LSHELDVIQSLHFSDYFLIVADVLAYARRRGILTGPGRGSAAGSLVAYALSITDVDPIKY
GLLFERFLNPERASVPDIDLDFPDGRREEVIRYVADKYGRDRVAQIITFGTFGAKAALRE
TAKALGVPGREAEQVAALLPSKQSVTLRQWHAESAAFRRAVAAVPQGREWLAVAQKLEGL
PRHTSIHAAGVIISPEPLVRFVPLQPSHGEWPLTQYAMGALEALGLLKIDFLGLRTLTLI
EQIVRLIERQTGKPFDIRTLPLNDEKTYALLGAGDTNGIFQLESSGMKRVLAELRPSQLE
DVVAVNALYRPGPMQMIPVYIRRKRGEEPVSYAHPDLETILAPTYGVLIYQEQIMQIAAR
LAGFSLGQADVLRRAVAKKEKALLAKQHQAFVAGCVANGYPKAVAEELYRHIVRFADYGF
NRSHAVSYALLSYAMAYMKAHYPLCFYAVMLTNASGDREKAAVYYWEAARKGINVLLPSV
NKSGFRSFVEGSAIRLGLAMVKQVGSAAKLIVEERKANGPFADFFDFAVRLLPKGLGRPA
LEALISVGAFDEFGADRASLLASIDIAIEHAQWVQALEAGGLSLKPKYAAAHSWPLSERR
RREAEFLGFAVTPHPAAVCRPLLQAAGAVCVADVQGPSTVVGGAVVRIRKTRTKQGEEMA
FFTVGDESGELEAVAFPNVYRRAADILKEGQFVLLAGTIEVRGGRRQLIIRRAERLLVSA
LYINAGHALSDGPRLAALKQLLEQHHGSIPVYLYDEAKRKLLRLPERYAVDFTAPLVDEL
LSLFGAGRVAVK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtccacttgcatgtgttgagcggatacagtttgtttcaaagtgcggcggcggtg
gaggcgcttgcagcgagggcgaaacagctcggctatcaagcgctcgcgctcaccgaccgg
aatgtgttgtatggcgctattccgttttaccgggaatgcaagcagaacggcattcgcccg
attatcggcgtgacggctgatgtcgctctttctggggaggaagcgttcccgctcgtgctg
ttggccgccaatgaagaggggtatcgccatttgcttgaaatcagcaccatgatgcaaatg
ggggaaacaaagcatatggaggaagccgctcttgtgcgcttaagcggcggcatcatcgcc
atcactcccggaagcgagggacgcgtcgagtcgcttgtggccgctggggaatgggagcgg
gcgaaagaggcgcttggccgttatcatcagctgtttccaggacggctgtatgtcgccgtt
cagcgcggcgagcaaacgcgagccccatatgaagccgggttgttgcagctggcggaggaa
accggcgtcccgatcgtggcgacgaacgacgtccgttacgtggagcgcagcgatgccgtg
gcgtggcgttgcttgcaggccatcggccgcggcgcgctgctcgctgacattgaggacgat
aacggccgctatttggcggggccagaggagatggcgcgccggtttgcggacttgccggag
gcgctcgagaacagcctggcgatcgccgatcaatgcgagctgcagatcgagtttggcggc
tggcggctgccggcgtaccccgttccggacggagagacggccgacagttatttgcgccgc
ttatcggaacaagggctcgcccgacgcgtgccgtcggccgatgagcgctactggcgtcgg
ctttcgcatgagctggatgtgattcagtcgcttcatttcagcgactattttttgatcgtc
gccgatgtgctcgcctacgcccgccgacgcggcatcttaaccggcccgggccgcggttcg
gcggccgggtcgcttgtcgcctacgcattgtcgatcaccgatgtcgatccgatcaagtat
gggcttttgtttgaacggtttttaaatccggagcgggcgtcggtgccggatattgacttg
gattttcctgatggccggcgcgaagaagtgattcgctatgtggcggataaatacgggcgc
gaccgcgttgcgcaaatcattacgttcggcacgttcggcgccaaagcggcgctgcgcgag
acggccaaagcgcttggcgtccctgggcgggaggcggaacaggttgcggcgctcttgccg
agcaaacaaagtgtgacgcttcgtcaatggcatgccgagtccgccgcttttcggcgcgcg
gtggcagcggttccgcaagggagagagtggctggctgttgcgcaaaaactggaagggctg
ccgcgccatacgtcgatccacgctgctggtgtcatcatcagcccggagccgctcgttcgc
ttcgtgccgctgcagccaagccatggcgaatggccgctgacgcaatacgcgatgggggcg
cttgaagcgcttggattgctgaaaattgattttctcggtttgcgcacgctcacgttgatc
gagcagatcgtgcgtttgatcgagcggcagacaggaaagccgtttgacatccgcacgctg
ccgctcaatgatgaaaaaacgtacgcgctgcttggcgctggagatacaaacggcattttc
cagctcgaatcaagcgggatgaagcgcgtgctcgccgagctgcggccgtcgcaattggaa
gatgtcgtcgccgtcaatgccttgtatcgtccggggccgatgcaaatgatccccgtttac
atccggcgcaagcgcggggaagagccggtgtcctatgcccatcctgatcttgagacgatt
ttggcgcccacatacggggtgttgatctaccaggagcaaattatgcaaatcgccgcccgg
cttgccggattttcgctcggacaagcggacgtgcttcgccgggcggtggcgaaaaaagag
aaagcgctgcttgccaagcagcaccaggcgtttgtcgccggctgcgtggcgaacggctat
ccgaaagcagtcgccgaggaactgtaccgacacatcgtccgctttgccgattacggcttc
aaccgaagccacgcggtcagctatgcgctgttgtcgtatgcgatggcgtatatgaaagct
cattacccgctttgtttttatgcggtcatgctcaccaatgcttccggcgaccgagaaaaa
gcggcggtatactattgggaggcggcgcgaaaagggatcaacgtccttttgccgtcggtc
aacaaaagcggttttcgctcttttgtggaggggagtgccattcgccttgggctcgcgatg
gtgaagcaagtcggctcggcggcgaagctgattgtcgaggagcggaaagcgaacggaccg
tttgccgacttctttgatttcgctgttcgcctgctgccaaaagggctcgggcgcccggcg
ctcgaggcgctcatttccgttggagcgtttgacgagttcggtgcagatcgggcttcgctt
cttgccagcattgacattgcgatcgaacatgcgcaatgggttcaggcgctcgaagccgga
gggctgtcgttaaaaccgaaatatgctgccgcacattcgtggcctttgtccgaacggcgg
cggcgggaagcggagtttcttggcttcgccgtcaccccgcatccggcggcggtgtgccgc
ccgttgctgcaagcggcgggggcggtgtgtgttgccgatgtgcaaggtccgtcaactgta
gtcgggggagcggtcgtccgcatacggaaaacgagaacaaagcagggtgaagaaatggcg
tttttcaccgtcggcgatgagagcggggaattggaggcggtggcgtttccgaacgtttac
cgccgcgcggcggacatattgaaagaaggacagtttgtattgcttgccggaacgattgag
gtgcgcggcggacggcgtcagctcatcatccgccgcgccgagcgcctgctcgtgtcagcg
ctgtatattaacgcaggccatgcgctatcggacggaccgcggcttgcggcgttgaagcag
ctgctcgaacaacaccacggaagcattccggtttatttatacgacgaagcgaagcggaag
cttctccgcctgccggaacggtatgcggttgacttcaccgcgccgcttgtcgacgaattg
ctctctctattcggtgctgggcgcgtcgctgtcaaataa
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