Geobacillus sp. Y412MC52: GYMC52_2886
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Entry
GYMC52_2886 CDS
T01399
Name
(GenBank) helix-turn-helix domain protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
gya
Geobacillus sp. Y412MC52
Pathway
gya02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gya00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GYMC52_2886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gya03000
]
GYMC52_2886
Transcription factors [BR:
gya03000
]
Prokaryotic type
Helix-turn-helix
Other families
GYMC52_2886
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
TPR_1
TPR_2
HTH_19
RMD1-3
HTH_31
RapH_N
TPR_7
ANAPC3
TPR_16
CFAP70_TPR_C
TPR_11
Motif
Other DBs
NCBI-ProteinID:
ADU95254
LinkDB
All DBs
Position
complement(2945626..2946900)
Genome browser
AA seq
424 aa
AA seq
DB search
MKLGDRLKFARLMKGLTQEETAEGIISVSYLSKIENNQVIPSQEVLEWLFRRLDIRPGGN
ETMPSWFEWVMSWYKAMTNRDVPAAREMYETVKERCEQSGDAEAMIYFQLMRIRYLLLLG
DKKGAETAAQSVRDWYGSLSDDMRYYYWKFFGLLYYCQEKYDDALHCYQKAEQLLKGEWK
TSGEEADLAYLSALAFSRLWKWFQCLQYAERALALSQAEYDLRRSAECHVLLAICHRRCG
EIDKAVDHCLLAQKAARMVDDRRLLGIVEHNLGHLKGMKRQYREAVQHYENSLIYKADAP
LDARLITLLSLVRVHCDAKHYRKASMAVEEGWKQLAQAPTGASEHYEYYLHFSIYRLLLS
EEDEPLERLLKQEAIPYFQKKKEYDDASLYAEYLADCYMRRRQYKQAAQYYQLSCSLLRT
QTGV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactcggcgaccgcttgaaattcgcccgcttgatgaaaggcctgacccaagaagaa
acggctgaaggcattatttcggtttcttatttatcgaaaattgagaataaccaagtcata
ccgagccaagaggtgctcgaatggctgtttcggcggctggacatccggccgggtggaaac
gaaacaatgccttcatggttcgaatgggtgatgtcgtggtataaggcgatgacgaaccgt
gatgtgcctgccgcgcgggaaatgtatgaaacggtcaaagaacgatgcgagcagtctggg
gatgccgaagccatgatttattttcagctgatgcgaatccggtatttgctgcttcttggc
gacaaaaagggggcggaaacggcggcgcaaagcgtgcgggactggtatgggtcgttgagt
gatgacatgcgctattattattggaaattttttggccttttgtattattgccaagaaaag
tacgatgacgccttgcattgttatcaaaaggcagaacagttgttgaagggagaatggaaa
acgagcggggaggaagctgatttggcttacttgtcggcgcttgctttcagccgtctgtgg
aaatggtttcaatgccttcaatacgccgagcgcgcgctggcgctcagccaggcggaatac
gacttgcggcggagcgccgaatgccatgtgctgctggcgatttgccatcggcgctgcggg
gagatcgacaaagcggtcgaccattgcctgttggcccaaaaggcggcgaggatggtggat
gatcgacggcttcttgggattgtggaacacaatctcggccacttgaaaggaatgaaacgt
caataccgcgaggcggtgcaacattatgagaacagtttgatctataaagcggacgccccg
ctggatgctcggctcatcacgcttttgtcgctcgttcgcgtgcattgtgatgccaagcat
tatcgcaaagcgtcgatggctgtcgaggaagggtggaaacagctcgcacaagcccctacc
ggcgcgtccgagcattatgagtattatttgcatttttccatttaccggctgcttttgagc
gaagaagatgaaccgttggagcggctgctcaaacaggaggcgattccctatttccaaaaa
aagaaggagtatgacgacgcgtcgttgtatgccgaatatttggcggattgttatatgcgg
aggcgccaatacaagcaggcggcccaatattatcagctaagctgctccctcttgcggacg
caaaccggcgtttga
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