Geobacillus sp. Y412MC52: GYMC52_3517
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Entry
GYMC52_3517 CDS
T01399
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gya
Geobacillus sp. Y412MC52
Pathway
gya03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYMC52_3517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gya03400
]
GYMC52_3517
Enzymes [BR:
gya01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GYMC52_3517
DNA repair and recombination proteins [BR:
gya03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYMC52_3517
Prokaryotic type
GYMC52_3517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADU95859
LinkDB
All DBs
Position
complement(3549447..3550136)
Genome browser
AA seq
229 aa
AA seq
DB search
MPILKNDWAPLLEEEFQKPYYLKLREFLKVEYRTRTIYPDMHDIFNALHYTPYANVKVVL
LGQDPYHGPGQAHGLSFSVKPGVPVPPSLVNIFKELHDDLGCYIPDNGYLVKWAEQGVLL
LNTVLTVRRGQANSHRGKGWEQFTDRVIELVNEKDDPVVFLLWGRNAQEKKERITNPRHL
IIEAPHPSPFSAARGFFGHRPFSRTNAFLMKCGREPIDWQIENIGVRAE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgccgattctcaaaaacgactgggctccgctgcttgaagaggagtttcaaaaaccatac
tacttgaagctgcgcgaatttttgaaagtagagtaccgaacgcggacgatctatcccgat
atgcacgatattttcaacgcccttcattatacaccgtatgcaaacgtcaaagtcgtgctg
ctcgggcaagatccgtaccacggcccgggacaggcgcacgggcttagtttttccgtcaag
ccgggcgtgccggtgccgccgtctttggtgaacatttttaaagagctgcatgatgacctt
ggctgctatataccagataacggctatctcgtgaaatgggccgagcaaggggtgttattg
ttaaacacggtgctgaccgtccgccgcggccaggcgaactcccaccgcggcaaagggtgg
gaacaattcaccgaccgcgtcattgaactcgtcaatgaaaaagacgatccggtcgtcttt
ttgctttggggccggaacgctcaggagaaaaaagaacggattacgaatccgcgccatctg
attattgaagcgccgcacccgagcccgttttccgccgcgcgcggctttttcggccatcgc
ccgttttcgcggacgaacgcgtttttgatgaaatgcggacgcgaaccgatcgactggcaa
atcgaaaacatcggcgtccgcgctgaataa
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