Geobacillus sp. Y412MC61: GYMC61_0164
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Entry
GYMC61_0164 CDS
T01101
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
gyc
Geobacillus sp. Y412MC61
Brite
KEGG Orthology (KO) [BR:
gyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gyc03019
]
GYMC61_0164
03009 Ribosome biogenesis [BR:
gyc03009
]
GYMC61_0164
Enzymes [BR:
gyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GYMC61_0164
Messenger RNA biogenesis [BR:
gyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GYMC61_0164
Ribosome biogenesis [BR:
gyc03009
]
Prokaryotic type
rRNA helicases
GYMC61_0164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACX76864
LinkDB
All DBs
Position
177296..178606
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AA seq
436 aa
AA seq
DB search
MAETQFTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLL
PIMEKIKPERAEVQAVITAPTRELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKAL
EKLNVQPHIVIGTPGRINDFIREQALDVHTAHILVVDEADLMLDMGFITDVDQIAARMPK
DLQMLVFSATIPEKLKPFLKKYMENPTFVHVNPKQTANENIEHVLIPLRGREKTKLLHDV
LLSYNPYLAIVFVNTRKMADEVADRLAEQGLKVGVLHGDLTPRERRKMMNLIRDLEFQYV
VATDLAARGIDIEGVSHVINYELPDDLQFYIHRAGRTARAGYSGIAATIYEPSDQDAIAR
LEKMGISFVHRDLVRGEWKELPPWNRRSKRAGEKDDELALLFAKLKKTKQVKPGYKKKLR
AELEKKKKRLGRFKKS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacgcagtttactcgttttccgtttcaaccgtttatcatcgaagcgatcaag
acgcttcgtttttataaaccgacggaaattcaagagcgcatcattccgggggcgctgcgc
ggcgaaagcatggtcggccaatcgcaaactggaacgggaaaaacacatgcgtacttattg
ccgatcatggaaaaaatcaagccggaacgcgccgaagtgcaagccgtcatcacggcgccg
acgcgcgagttagcgacgcaaatttaccacgaaacgctgaaaattacgaagttttgcccg
aaagatcggatgatcgtcgcccgttgcttgatcggcgggacggataagcaaaaagcgctc
gaaaagctcaacgtgcagccgcatattgtcatcggcacgccggggcgcatcaacgatttc
atccgcgagcaggcgcttgatgtgcatacggcccacatccttgtcgtcgatgaagccgac
ttgatgctcgatatgggctttatcactgatgtcgaccaaatcgccgcccggatgccgaaa
gacttgcaaatgctcgtcttttcagcgacgattccggaaaagctgaagccgtttttgaaa
aaatatatggaaaacccgacctttgtccacgtcaacccgaaacagacggcgaacgaaaac
atcgaacatgtgctcatcccgctgcgcggacgcgagaaaacaaaacttcttcatgatgtg
ctcctcagctacaacccgtatttggccatcgtatttgtcaacacaaggaaaatggctgac
gaggtcgccgaccgtctcgctgagcaaggattgaaagtcggcgtgctgcacggcgatttg
acgccgcgcgagcggagaaagatgatgaatctcatccgcgatttggagtttcaatatgtc
gtcgcgaccgatttggcggcgcgcggcatcgatattgaaggcgtcagtcatgtcatcaac
tacgagttgcctgatgatctgcagttttatattcaccgcgccggacggacggcgcgcgct
ggctatagcggcattgcggcgacgatttacgagccgtctgaccaagatgcgattgcccga
ttggaaaaaatgggaatttcgtttgtccaccgtgatctcgtgcgcggcgaatggaaggag
ctgccgccgtggaaccggcggagcaagcgggcgggcgaaaaggatgacgaactggcgctg
cttttcgccaaactgaaaaaaacgaagcaggtgaagccgggctacaaaaaaaagctgcgc
gcggagctggagaagaagaaaaagcggcttggccgcttcaaaaaatcataa
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