Geobacillus sp. Y412MC61: GYMC61_0788
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Entry
GYMC61_0788 CDS
T01101
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gyc
Geobacillus sp. Y412MC61
Pathway
gyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYMC61_0788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gyc03400
]
GYMC61_0788
Enzymes [BR:
gyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GYMC61_0788
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GYMC61_0788
DNA repair and recombination proteins [BR:
gyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYMC61_0788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ACX77457
LinkDB
All DBs
Position
783904..784728
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK
FLKFLLDRDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVY
AKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRPVKALLLDQTVVAGFGNIYVDES
LFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGAFQHSLF
VYGRKGEPCKRCGTPIEKTVVAGRGTHYCPRCQR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccggaggtggaaacgatccgtcgtacgcttttgccgcttattgtcgga
aaaacgattgaggatgtgcgcatcttttggccgaacatcatccgccatccgcgagacccc
gaggcgtttgcggcaagaatgatcggacagacggtgcgtggtttggaacggagagggaaa
tttttgaaattcctgctcgaccgcgatgcgctcatttcccatttgcgcatggaagggcgc
tacgccgttgcttctgccctcgagccgctcgaaccgcatacgcacgtcgtgttttgcttc
acggacggcagcgaactccgttaccgcgacgtgcgcaagttcggaacgatgcacgtttat
gccaaagaagaagctgaccgccggccgccgcttgctgagcttgggccggagccgctttcc
ccggcgttttccccagctgtattggcggagcgggcggtgaaaacgaaacggccggtcaaa
gcgttgctccttgatcagacggtcgtggctgggtttggcaatatttatgtcgacgaatcg
ctgtttcgcgccggcattcttcccggccggccggccgcctcgctctccagcaaagagatc
gagcgcctgcatgaggaaatggtggcgacgatcggcgaggcggtcatgaaagggggaagc
acggtgcgcacgtacgtgaacacgcaaggggaagcgggtgcgtttcagcatagcttgttc
gtctacggacgcaaaggagagccatgcaaacgatgcggcacgccgattgaaaaaacggtc
gtcgccggccgcggcacgcattattgcccgcgctgccagcgctag
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