Geobacillus sp. Y412MC61: GYMC61_1146
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Entry
GYMC61_1146 CDS
T01101
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gyc
Geobacillus sp. Y412MC61
Pathway
gyc03420
Nucleotide excision repair
gyc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GYMC61_1146
03430 Mismatch repair
GYMC61_1146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gyc03400
]
GYMC61_1146
Enzymes [BR:
gyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYMC61_1146
DNA repair and recombination proteins [BR:
gyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GYMC61_1146
MMR (mismatch excision repair)
Other MMR factors
GYMC61_1146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Terminase_6N
SUIM_assoc
Motif
Other DBs
NCBI-ProteinID:
ACX77802
LinkDB
All DBs
Position
1158177..1160354
Genome browser
AA seq
725 aa
AA seq
DB search
MMNFLSEKLLAHLNKEQQEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKQVAPWNI
LAITFTNKAAREMKERVQALLGGAAEDVWISTFHSMCVRMLRRDIDRIGINRNFSILDPT
DQLSVIKAILKDKNIDPKKFEPRTILATISGAKNDLLTPEQFAKRASTYYEKIVGDVYQE
YQQRLLRNHSLDFDDLIMTTIHLFDRVPDVLQYYQYKFQYIHIDEYQDTNRAQYTLVKKL
AERFQNICAVGDADQSIYRWRGADIRNILSFERDYPNAKVILLEQNYRSTKRILQAANEV
IAHNVNRKPKRLWTENPEGKPIVYYEAMNEVDEAQFVARRIQEAVESGERRYRDFAVLYR
TNAQSRVIEEMFLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPK
RGIGASTIDKLVRYAAEHELSLFEALGELEMIGFSTKTAGALAAFRGQLEQWTQLQEYVP
VTELVEEVLDQSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLVAFLTDLA
LISDLDELNGTDQAAEGDAVVFMTLHAAKGLEFPVVFLIGMEEGIFPHLRSLENEDEMEE
ERRLAYVGITRAEEELVLTNAQMRTLFGNIQMNRPSRFLDEIPAHLLETVSRGKPSVSRS
ASARLQAGGAIGVWKVGDRANHRKWGIGTVVSVRGEGDDQELDIAFPSPIGMKRLLAKFA
PIEKV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattttttatcggaaaagctgcttgcgcatttaaacaaagagcagcaagaagcc
gttaaaacgacagaaggcccattgctcatcatggcgggagcgggcagcggaaaaacgcgc
gtgctgacgcaccggatcgcctatttgatggcggaaaaacaggtggcgccgtggaatatt
ttagccattacgtttacgaacaaagcggcgcgtgaaatgaaggagcgggtgcaggcgctc
ttaggcggggcggcggaagacgtgtggatttcgacgttccattcgatgtgcgtccgcatg
ctgcgccgcgacattgaccgcatcggcatcaatcgcaatttttccatccttgacccgacg
gatcagctttcggtcatcaaagcgattttgaaagacaaaaatatcgatccaaaaaaattt
gagccgcggacgattttagcgacgatcagcggggcgaaaaacgatttgctcacgcccgag
caattcgcgaagcgggcgtcgacgtactacgaaaagatcgtcggcgacgtgtatcaagag
tatcaacagcgccttctccgcaatcattcgctcgatttcgacgatttgatcatgacgacg
atccacttgtttgaccgcgtgccggatgtgcttcaatattaccagtataagttccagtac
atccatatcgatgagtaccaggatacgaaccgcgctcaatatacgctggtgaaaaagctc
gcagaacggttccaaaatatttgcgccgtcggcgatgccgaccagtcgatttaccggtgg
cgcggggcggacattcgcaacattttatcgtttgagcgcgactacccgaacgcgaaagtc
attttgcttgaacaaaactaccgctcgacgaaacgcattttgcaagcggcaaatgaagtc
attgcgcataacgtcaatcgaaagccaaagcggttgtggacggaaaacccggaagggaag
ccgatcgtctattatgaagcgatgaacgaagtggacgaagcgcaatttgtcgcccgccgc
attcaagaggcggttgagagcggggagcgccgctaccgcgattttgccgtgctttatcgg
acgaacgcccagtcgcgcgtcatcgaggaaatgtttttaaaagcgaacattccgtaccaa
atcgtcggcggcttaaagttctatgaccggaaagaaattaaagacattctcgcttacttg
cgcgtcatcgccaaccccgatgacgatttgagcttgcttcgcatcatcaacgtgccaaag
cgcggcatcggcgcctctacgatcgacaaacttgtccgctatgcggccgagcatgagctg
tccttgtttgaagcgctcggcgagctggagatgatcggcttcagcacgaagacggccggg
gcgctcgccgcgtttcgcggacagcttgagcaatggacgcagctgcaagaatacgttccg
gtgacggaacttgtggaggaagtgctcgaccaatcgggctaccgcgagatgctcaaggcg
gaacggacgattgaagcgcaaagccggcttgagaacttggacgagtttttgtcggtgacg
aagcatttcgaaaatgtaagcgacgataaatcgctcgtcgcctttttaaccgacttggcg
ctcatttctgatttggacgagctgaatgggacagatcaggcggccgagggcgatgccgtt
gtcttcatgacgctgcacgccgccaaagggcttgagtttccggtcgtgtttttgattggc
atggaagaaggcatttttccgcatcttcgttcactggagaatgaggatgaaatggaagaa
gagcggcggctggcgtatgtcggcatcactcgggccgaggaagagctcgtattgacgaac
gcgcaaatgcggacgctgtttggcaacatccaaatgaaccggccgtcgcgctttttagat
gagattcccgcgcatttgctggagacagtctcgcgcgggaaaccgtctgtttcccgttca
gcgtccgctcgcttgcaggcaggcggcgccatcggggtgtggaaagtcggcgaccgggcg
aaccatcggaaatggggaatcggtacggttgtcagtgtccgtggcgaaggtgacgaccaa
gaactcgatatcgccttcccgagcccgatcggcatgaaacgtctgctcgctaaatttgcg
ccgattgagaaagtatag
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