Geobacillus sp. Y412MC61: GYMC61_1488
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Entry
GYMC61_1488 CDS
T01101
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gyc
Geobacillus sp. Y412MC61
Brite
KEGG Orthology (KO) [BR:
gyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gyc03400
]
GYMC61_1488
DNA repair and recombination proteins [BR:
gyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYMC61_1488
Archaeal homologous recombinant proteins
GYMC61_1488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
AAA_21
ABC_tran
MMR_HSR1
AAA_18
Spike_torovirin
Motif
Other DBs
NCBI-ProteinID:
ACX78128
LinkDB
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Position
1517529..1520873
Genome browser
AA seq
1114 aa
AA seq
DB search
MKPISLTIAGLHSFREKQTIDFTALCEGGVFGIFGPTGSGKSTILDAMTLALFGSVERAA
NRTQAIINHAEQELFVSFTFELENAAGAKRYTVERSLKKVDEWRTRSAVCRLIEHRSEPV
VLADKLSEVDKAIEQLLGLTMEDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFHLERYG
DQLNKKLKDRLAAARQEWEKIEAEKAGLGDASKAALEQAEADVRELAGLFAKRKKELEEV
EADVERTKQRWAWQQEKEAVEQELAALRQHESAIRELEVKKERAEQAERIWPYWEQCEQA
CRLRAEAFRRYEGLARRLEEAQLSYEEAARRYERARQEKAQREPELLVQMERLRQAAQLE
QQMEVLGQELAALSEERKRLIAQEKAAARRFEEASVWYERGAKRQRELKEELKQHEEALD
GKDEAERAYRQKQHIEQAASAIARVDAQLQQKEAVWRRAKEEKLERERRSAAVGSRLQEL
FRRVERTYRFVCWRQQDAEKQLYTLQKTMEAERQRAEEARTAQLASALAERLRPGEPCPV
CGSREHPHPAAAPHDVQLERLSELEAERQRYEQDWQMIISFKAQLEQLAELAAGHEAPPL
FAESRSVEEVVDLTVEVRALAQDVIELKEAVYRVLAQWNEAESARREAEKACQWIAADIE
ALQVEKQRLEEERRQLEQQWRQMYPFLSLETIDAVYEQLCERENVRRDVQKRLEDSVLFL
EEKQRAKEEAAKERSRLETERVRLDSLISAKQQQWNEYERQRGEKAGSGPAAVHLQKAEA
EWRQLQNGEQQAYEAWQRAQREYQMLESETKAAKQAWEEGVRREEEALARWRGALLDTMF
ADAEQVKQAKAEKAQRDEWDEAIRRYWRQIEQAEHRLAQLAAAIGGAAVSAEQWETMQRV
YAELKEQVEAMTQQLGAAQAKVEELKKKHSRFVELEEKQTELSRHIERYKQLQALLRGNS
FVEFMAEEQLEQVTAMASERLQRLTRHRYSLELDSQGGFLIRDDANGGVRRPVSTLSGGE
TFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDAELLETVISALEKLHTERLAVGV
ISHVQEIRHRLPRRLIVEPAEPSGRGTRVWLEMI
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatctcgctgacgatcgccgggcttcatagctttcgtgaaaagcagacgatc
gatttcaccgcactgtgtgagggcggtgtgttcggcattttcgggccgactggaagcggc
aaatcaacgattttagacgccatgacgctcgccttgttcggcagcgtcgagcgggcggcc
aaccgcacgcaggcgatcatcaaccacgcggagcaagagttgtttgtctcgtttacgttt
gagctggaaaatgcggcaggagcgaaacggtatacagtcgaacgaagcttaaaaaaagtg
gacgaatggcggacgcgcagcgccgtttgccgcctgatcgagcatcggtccgagccggtc
gtgctcgccgataaactatcggaggtggacaaggcgatcgagcaattgctcggcttgacg
atggaggatttcacccgggcggtcgtcttgccgcaaggaaaatttgccgaatttttatcg
ctcaaagggtcggagcggcggcaaatgctgcagcgcctcttccatcttgagcggtatggc
gatcagttgaataaaaagttgaaagaccggcttgccgccgctcggcaagaatgggaaaaa
atcgaagcggaaaaagcggggcttggcgatgcttcaaaagcagcgctcgagcaggcagag
gcggatgtgcgggagctcgcggggctgtttgccaagcgaaaaaaagagcttgaggaagtc
gaagcagatgtggaacgaacaaaacaacgatgggcgtggcagcaagaaaaagaagcggtc
gaacaagagctcgccgcgctgcgccaacatgaatccgccatccgcgagcttgaggtgaaa
aaggagcgcgccgagcaagcagagcgcatatggccgtattgggagcagtgcgagcaggca
tgtcgcttgcgggcagaggcgtttcgtcggtatgaaggactggcgcgtcggttagaggaa
gcccaattgagctatgaagaagcggcgcggcgttatgaacgcgcgcgccaagaaaaggcg
cagcgcgaaccggaattgctcgtccagatggaacggctgcggcaggcggcgcagcttgag
cagcaaatggaagtgcttggacaggagctcgcagctcttagtgaagagaggaagcgactc
attgcccaggagaaggcagctgcacgccggtttgaagaggcgtcggtctggtatgagcgc
ggcgcgaagcggcagcgggagttgaaagaagaactgaaacagcatgaagaggcgctggat
ggaaaagatgaggcagagcgggcgtacaggcagaagcagcatattgagcaagcggcgtca
gccatcgctcgcgtcgatgcccaacttcagcaaaaggaggccgtttggcgtcgggcgaaa
gaggaaaagttggagcgggaacgccgatcagccgctgtcggctcccggcttcaagagctg
ttccggcgtgtggagcggacgtatcgtttcgtctgctggcggcagcaggacgctgaaaaa
caattgtatacgttgcagaaaaccatggaggcggagcgacagcgagccgaagaagcgcgg
acggcgcaactcgcctccgccttggctgagcggctccgtcccggcgagccgtgtccagtg
tgcggatcgcgcgagcatccgcatccggccgccgcaccgcacgatgtccaacttgagcgt
ctgtccgagcttgaggcagagcggcagcggtatgaacaagattggcaaatgatcatttcg
ttcaaggcgcagctcgagcagcttgccgagctggcggcaggccatgaagcgccgcctctg
tttgctgaaagccgatcggtggaggaggtcgtcgacctcactgtggaagtgcgggcgctt
gcgcaagatgtcattgaattgaaagaagcggtctaccgggtgcttgcccaatggaatgaa
gccgagtcagcgcggcgcgaagcggagaaagcgtgccaatggatagcggcggacatcgaa
gcgctgcaagttgaaaagcagcggctggaggaagagcggcggcaacttgaacagcaatgg
cggcagatgtatcctttcctttcgcttgagacgatcgatgcggtgtatgaacagctgtgt
gaacgggaaaacgtgcggcgcgacgtgcaaaaacggctggaggacagcgtgctgttttta
gaggaaaaacagcgggcgaaagaggaagcggccaaagagcggagccggcttgagacggag
cgggtgcgtcttgactcgctgattagtgccaaacagcagcaatggaacgaatatgagcgg
caacggggcgagaaggcgggctcaggcccagcggctgtgcatcttcagaaggcggaggcc
gaatggcgccagctgcaaaacggcgagcaacaggcgtatgaggcctggcagcgagcccag
cgggaatatcaaatgcttgaaagcgaaacaaaagcagccaagcaggcgtgggaagaaggc
gtccgccgcgaagaagaggcgctcgctcgctggcgcggcgcgcttttggacaccatgttt
gccgatgccgaacaagtcaagcaagcaaaggcggaaaaagcgcagcgagatgaatgggat
gaggcaatccgccgctattggcgccaaatcgagcaagccgaacatcgcctcgcccagctg
gccgccgccatcgggggggcggcggtgagcgctgaacaatgggagacgatgcagcgtgta
tacgccgagttgaaggagcaagtggaggcgatgacgcagcagcttggggcggctcaagcg
aaggtggaagagttgaaaaaaaaacatagccgctttgttgaactggaggagaagcagacg
gagctcagccggcacatcgagcggtataaacagctgcaggcgctgcttcgcggcaacagc
tttgtcgaatttatggctgaagagcagctcgagcaagtcaccgccatggcttcggaacgg
ctgcagcggctgacacggcaccggtattcgctcgaattggattcgcaaggcgggtttctg
atccgcgatgatgccaatggcggcgtcagacggccggtatcgacgctctcgggtggggag
acatttttgacgtcactgtcgttggcgttggcgttatcggcgcaaattcagctgcgcggc
gagtatccgctccgctttttcttcttggacgaagggtttggcaccctcgatgctgagctg
cttgagacggtcatttccgccttggaaaagctgcataccgagcggctggcggtcggcgtc
atcagtcatgtacaagaaattcgccaccgtctgccgcgacggctcatcgtcgaaccggct
gaaccgtccggacgcggcacgcgcgtctggctggaaatgatttga
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