Geobacillus sp. Y412MC61: GYMC61_1516
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Entry
GYMC61_1516 CDS
T01101
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
gyc
Geobacillus sp. Y412MC61
Brite
KEGG Orthology (KO) [BR:
gyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gyc03000
]
GYMC61_1516
Transcription factors [BR:
gyc03000
]
Prokaryotic type
Helix-turn-helix
Other families
GYMC61_1516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
GAF
PAS_4
Mg_chelatase
PAS
AAA_2
AAA
PAS_8
HTH_23
PAS_9
CodY
PAS_7
MCM
HTH_28
HTH_30
HTH_29
AAA_22
HTH_50
AAA_16
HTH_psq
nSTAND3
HTH_7
HTH_17
AAA_3
HTH_1
AAA_7
Diguanyl_cycl_sensor
DUF815
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
ACX78154
LinkDB
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Position
1547953..1549884
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AA seq
643 aa
AA seq
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MIVTREQVKSMWEKFVFHNELDPDLPPMIRDSWLRSKKAMVDPFRPYGWIKEIDNEKYRS
LIDWSLPLMEGLYSIVKGSGFLVILCNENGQLLLSIGDREPLARAEEIGFIAGADWSEQV
MGTNAIGTSIAIDRPIQVFAEEHYTKICQSWTCSAAPIHDPDGRIIGVLNMSGPYEKVHS
HTLGMVVSAVKAIEYQLKLHENAEKNVMMQRFLEATTNNMKEGILIIDRDGKIVKANNQL
KKLFRIPQLQLEEKKLDDLFNDPSICSNHPLHLQNQELHLSVKPSNAVHHVLVDKIPIYE
KKERIGSMIIVKEIEKVRQFVNHLSGNQAKITFADMIGQHPCFIEKMNEARLAAATDSNV
LILGESGTGKEMVAQAIHNESKRRNKPFIAINCGGIPRDLLGSELFGYVDGAFTGAKKGG
SAGKFELANGGTLFLDEIGEMSLEMQVLLLRVIQEKEVMRIGGHKVIPVDVRIIAATNKD
LRREVQKGSFREDLFFRLNVMPIVLPPLRERKEDIPLLVRHFIERLAHKRDKPFPEIRSD
FLEALMQYDWPGNIRELQNMIERVLNQCTKPVLTAADLPEEIFQPSCSSQVRENVDISRN
EIKKQSIIEALKQCNGNISKAARYLGISRSTFYRQMDKWNIWY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgacccgcgaacaggtgaaatccatgtgggaaaagttcgtatttcataacgag
ctcgatcccgatttgccgcccatgattcgagactcttggcttcggtcgaaaaaagcgatg
gttgatccgtttcggccgtacgggtggattaaagaaatcgacaatgaaaagtaccgctcc
ttgatcgattggtcattgccgttaatggaagggttgtattcgattgtcaaaggatctgga
tttttggtgatcctgtgcaatgaaaacggacagttgcttttgtcgattggcgatcgcgag
cctttagcgagggcggaagaaatcggatttatcgcgggggcggactggagcgagcaagtg
atggggaccaacgccattggcacatcgatcgccattgatcgtccgattcaagtgtttgct
gaggaacattacacgaaaatatgccagtcatggacgtgttccgctgcccccatccatgat
cccgacggccgaatcattggtgtattgaatatgtcaggaccctatgaaaaagtgcactct
catacgctaggaatggttgtatcagccgtaaaggcgattgagtaccaactaaaattacat
gagaatgctgaaaaaaacgtgatgatgcaacggtttttggaagcgacaacgaacaatatg
aaagaaggtattttaatcatcgatcgcgatgggaagatcgtaaaggcgaacaaccagtta
aaaaagctgttccgtataccacaactgcaactggaagagaaaaagctcgacgatcttttc
aatgatccctctatctgttcgaaccacccgcttcatttgcaaaatcaagagctgcatcta
agcgtcaagccttcaaacgcggtgcaccatgtgttagttgacaagattccaatttacgag
aaaaaagaacgaatcggatcgatgatcattgtaaaagaaattgaaaaggtacgccagttt
gtcaaccacctatcgggaaaccaagcgaaaatcacgtttgcggatatgatcgggcaacac
ccgtgtttcattgagaaaatgaacgaagcgaggctcgccgcagcgacagattccaacgtg
ttaatattaggggaaagcggaacaggaaaagagatggtggctcaggcgattcataatgag
agcaagcggagaaacaaaccgtttattgccattaactgtggaggcataccgcgtgatctc
cttggcagtgagttgttcggatatgtggacggggcattcacaggagcgaaaaaaggggga
agcgccggaaagtttgagcttgccaatgggggaacgctttttttggatgagattggcgaa
atgtccttggaaatgcaagtgttgcttttgcgcgttattcaagaaaaggaagtgatgaga
attggcgggcataaagtgatccctgttgatgtcagaatcatcgcggcgaccaacaaagac
cttcgccgggaagtgcaaaaaggcagttttcgtgaagacttgtttttccggttgaacgtc
atgccgattgttcttccgccgcttcgagaaagaaaagaagatattccgcttctcgtccgt
cattttattgaaagactggctcacaaacgagataaaccgtttcctgagatacggtccgat
ttcttagaggcgcttatgcaatacgattggccaggaaatattcgcgagttgcaaaatatg
atcgagcgggtgctgaatcagtgcacaaaaccggtattgacagcggctgatttgccggaa
gaaatttttcagccgtcctgctcgtctcaagtcagggagaacgtagacatctcccgaaat
gagataaaaaagcaatccatcatcgaggcgttaaagcagtgcaacggcaacatttccaaa
gctgcccgttatttaggcatatcgaggagcacattttaccggcaaatggataaatggaat
atttggtattga
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