Geobacillus sp. Y412MC61: GYMC61_2030
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Entry
GYMC61_2030 CDS
T01101
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
gyc
Geobacillus sp. Y412MC61
Pathway
gyc02020
Two-component system
gyc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gyc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GYMC61_2030
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GYMC61_2030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gyc03021
]
GYMC61_2030
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gyc02035
]
GYMC61_2030
Transcription machinery [BR:
gyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GYMC61_2030
Bacterial motility proteins [BR:
gyc02035
]
Flagellar system
Flagellar assembly proteins
Stator
GYMC61_2030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
TetR_N
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
ACX78646
LinkDB
All DBs
Position
2039700..2040455
Genome browser
AA seq
251 aa
AA seq
DB search
MGSALKGEERKYWDEWIHGRDRHAAEELVQRYMPLVFYHVQRLSATLPSSVPKDELVSLG
LVGLYDALEKFDPSRDLKFDTYASFRIRGAILDGLRKEDWLPRSMRDKAKKIEGAIERLE
QRHMRSVTAKEIAAELGMTEEEVQAAASETFFSHWLPLGQTTVDEDEGLLSVRDDRAPLP
EEQIVKQEMIEKLAEAIGQLNEKEQLVISLFYKEELTFTEIGSLLHLSTSRISQIHAKAL
WKLRRFFEKEP
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcgctaaaaggagaagaacggaaatattgggatgaatggatccatggccgc
gaccgccacgcggccgaggagctggtgcagcgctatatgccgcttgttttctaccacgtg
cagcggctttcggcgacgctgccgagctccgtgccgaaggatgagctcgtcagccttgga
ctcgtcggcttatacgatgcgttggagaaatttgatccatcgcgtgatttgaagttcgac
acgtacgcctcgttccgcatccgcggcgccatcttagacggtttgcgcaaagaagactgg
ctgccgcgcagcatgcgcgataaggcaaaaaaaattgagggagcgatcgagcggcttgaa
cagcggcacatgcgatcggtgacggcgaaagagatcgccgctgagctcgggatgacggaa
gaggaagtgcaggcggcggcgagtgaaacgtttttttcccattggctgccgctcgggcag
acgaccgtcgacgaagatgaaggactgctttcggttcgcgacgaccgcgctccgcttccc
gaggagcaaatcgttaagcaggaaatgatcgaaaagctggctgaagccatcggacagctg
aatgaaaaagagcagctcgtcatcagtttgttttacaaagaggagctgacgtttacagaa
atcgggagccttttgcatttgtcgacatcaagaatttcgcaaattcatgcgaaagcgctt
tggaaactgcgccgcttttttgaaaaagagccatga
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