Geobacillus sp. Y412MC61: GYMC61_2053
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Entry
GYMC61_2053 CDS
T01101
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gyc
Geobacillus sp. Y412MC61
Pathway
gyc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GYMC61_2053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gyc03019
]
GYMC61_2053
03016 Transfer RNA biogenesis [BR:
gyc03016
]
GYMC61_2053
Enzymes [BR:
gyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GYMC61_2053
Messenger RNA biogenesis [BR:
gyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GYMC61_2053
Transfer RNA biogenesis [BR:
gyc03016
]
Prokaryotic type
tRNA degradation factors
GYMC61_2053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_RRP5
OB_RRP5_4th
KorB
Motif
Other DBs
NCBI-ProteinID:
ACX78669
LinkDB
All DBs
Position
2062712..2064883
Genome browser
AA seq
723 aa
AA seq
DB search
MEQEKRVFSIDVAGRPLIVETGELAKQANGAALVRYGDTVVLSTATASREAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILVSRLIDRPIRPLFAEGFRNEVQVVSMVMSV
DQDCAPEVAALIGSSVALTISDIPFEGPIAGVIVGRVDGQFVINPTVEQMEKSDLHLVVA
GTKDAINMVEAGADEVPEEVILEAIMFGHEEVKRLIAFQEEIAAQVGKEKMEVVLYEPDP
ALEAEIRQLAEADIKRAVQVPEKLARDAAIEDVKAGVIAKYEAEEADEEKLKQVQEILHK
LVKEEVRRLITVEKIRPDGRKVDEIRPLSSAVGVLPRTHGSGLFTRGQTQVLSVCTLGAL
GDVQILDGLDLEESKRFMHHYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVVPSER
EFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKNDDHYTILT
DIQGIEDHLGDMDFKVAGTRKGVTALQMDIKIKGLTREILEEALMQARKGRLEILDHMMQ
TLSEPRKELSKYAPKILIMHINPDKIREVIGPSGKQINKIIDETGVKIDIEQDGTIFISS
VDEAANQKAKQIIEDIVREVEVGQVYLGKVKRIEKFGAFVELFNGKDGLVHISELAEGRV
GKVEDVVSIGDEILVKVTEIDKQGRVNLSRKAVLRDARNIGGELPRESREKRGRRPERHR
MKP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagagaaacgcgtgttttccatcgatgtggccgggcggccgctcatcgtcgaa
accggcgagctggcgaagcaggcgaatggcgcggcgctcgtccgctacggcgatacggtc
gtgttgagcacagccaccgcgtcgcgagaggcgaaaaacgttgactttttcccgctcacc
gtcaactacgaggaacggttgtatgcggttggaaaaattcctggcgggtttattaagcgc
gaaggtcgcccgagcgagaaagccattttggtgagccgtctcatcgaccgaccgattcgc
ccgctgtttgccgaaggattccgcaacgaagtgcaagtcgtatcgatggtcatgagcgtt
gatcaagactgcgcgccggaagtagcggccttaatcggttcgtcggtggcgctgacgatt
tccgacattccgtttgaagggccgatcgccggtgtcatcgtcggccgcgtcgacggccag
tttgtcatcaatccgacggtcgagcaaatggaaaaaagcgatctgcatcttgtcgtcgcc
ggcacaaaagatgcgatcaacatggtggaagccggggcagatgaggtgccggaagaagtg
attcttgaagcgatcatgttcggccatgaggaagtgaagcggctcatcgccttccaagag
gaaatcgccgcccaagtcggcaaagaaaaaatggaagtcgtcctttacgagccggatcca
gcgctggaggcggaaatccgccagcttgccgaagcggacattaagcgagcggtgcaagtg
ccggagaaactggcgcgcgatgctgccattgaagatgtgaaagctggcgtcatcgccaaa
tatgaggcggaagaagcggatgaggagaagctcaagcaagtacaggaaattttgcataaa
ctcgtaaaagaggaagtgcgccgtttgatcacggtcgagaaaatccgtccggacgggcgc
aaagtcgatgaaatccgtccgctttcatcggcggtcggcgtcctgccgcgcacgcacggc
tccggtttgtttacgcgcgggcagacgcaagtgttgagcgtttgtacgcttggggcgctt
ggcgacgtgcaaattttggacgggcttgaccttgaagaatcgaagcggtttatgcaccat
tacaacttcccgccgttttccgtcggggaaaccgggccgatgcgcgggccggggcgtcgt
gaaatcggacacggggcgcttggcgaacgggcgctcgagccggtcgtgccgtcggagcgc
gaattcccgtatacgatccgcctcgtttcagaagtgcttgagtcgaacggctcgacatcg
caggccagcatttgcgccagcacgctggcgatgatggatgctggggtgccgattaaagca
ccggtcgccggcattgccatggggcttgtgaaaaacgacgaccattacacgattttgacg
gacattcaaggcatcgaagaccatcttggcgatatggactttaaagtcgccggcacgaga
aaaggcgtgacggcattgcaaatggacattaaaatcaaaggattgacgcgcgagattttg
gaagaggcgctcatgcaagcgcgcaaagggcggctcgagattttggatcatatgatgcaa
acgctcagcgaaccgcgcaaagagctgtccaaatatgcaccgaaaattttgatcatgcac
atcaacccggacaaaatccgggaggttatcggaccaagcggcaagcagatcaacaaaatc
atcgacgaaaccggcgtcaaaatcgacatcgaacaagacggcacgattttcatctcgtct
gtggatgaagcggccaaccaaaaagcgaagcaaatcatcgaagacatcgtccgcgaagtc
gaagtcggccaagtgtacttaggcaaagtgaaacggattgaaaaattcggcgccttcgtt
gagttgttcaacggcaaagacgggcttgtccatatttccgagctcgctgaagggcgggtc
ggcaaagtcgaagacgtcgtttcgattggcgatgaaattttagtgaaagtaacggaaatc
gataagcaagggcgcgtcaacctgtcgcgcaaagcggtgttgcgcgatgcccgcaacatt
ggaggggaactgccgcgggaatctagggaaaaacgaggaagacggccggagcgccatcgc
atgaagccttag
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