Gymnodinialimonas sp. 57CJ19: AADW23_00220
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Entry
AADW23_00220 CDS
T10345
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gyj Gymnodinialimonas sp. 57CJ19
Brite
KEGG Orthology (KO) [BR:
gyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gyj03009
]
AADW23_00220 (rimO)
Enzymes [BR:
gyj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AADW23_00220 (rimO)
Ribosome biogenesis [BR:
gyj03009
]
Prokaryotic type
ribosomal protein modification factors
AADW23_00220 (rimO)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WZN78737
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Position
44731..46098
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AA seq
455 aa
AA seq
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MSQNPPLLRPDLARARVPDDARPGQPRIGMVSLGCPKALVDSERILTRLRAEGYAISPDY
TGAEAVIVNTCGFLDSAKLESLDAIGEALEANGKVIVTGCLGAEPEYITGAHPKVLAVTG
PQQYEQVLDAVHGAVPPSPDPFVDLLPAAGVKLTPRHYAYLKISEGCDHKCKFCIIPDMR
GKLASRPQKAVMREAEKLVESGVKELLIISQDTSAYGVDWKGRDEKFPILGLSRDLATLG
AWVRLHYVYPYPHVRELIPLMADPANGLLPYLDIPFQHAHPDVLKRMARPAAASRTLDEI
RAWRADCPDITLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRIGCFQYENVDGARSNALP
DHVPAEVKQDRWDRFMEKAQAISEAKLQAKVGRTMQVLVDAVDEEGATCRTTADAPEIDG
NLFIDEGFEHLKPGDMVTVEVDEASDYDLWGTPTA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacccaccccttctccgccccgacttggcccgcgcccgcgtgcccgatgat
gcccgccccggtcagccccgtatcggcatggtgtcgctcggttgccccaaggccttggtg
gatagcgaacgcatcctgacccgcctgcgggccgagggctatgcgatcagccccgattac
accggggccgaagcggtgattgtgaacacctgtggcttccttgatagcgccaaacttgaa
agcctcgatgccattggtgaggcgttggaggccaacggcaaagttatcgtcacgggctgt
ttgggggcggagccggagtatatcaccggtgcccatcccaaggttctggccgtcaccgga
ccgcaacaatacgaacaggtcttggatgccgtccacggggccgtgccgccgtcgcccgat
ccgtttgttgatctgctgcctgcggcgggcgtgaagctgacgccgcgccactatgcctat
ctgaagatttccgagggctgcgaccacaagtgcaaattctgcatcatccccgacatgcgg
ggcaagctcgcctctcgccctcaaaaagcggtgatgcgcgaggccgagaaactggtggaa
agtggcgtgaaagagctgctgatcatctctcaggatacctccgcctatggcgttgactgg
aagggtcgagacgagaagtttccgatccttggtctgtctcgtgatctggccaccctgggc
gcttgggtgcgcttgcattacgtctacccctacccccatgtgcgcgagctgatccccctg
atggccgatcccgccaacgggttgctgccctatctggatatcccgttccaacacgcccac
cccgatgtgctcaaacgcatggcgcggcctgcggcggcgtctcgtacgcttgatgagatc
cgggcgtggcgggctgattgccccgatatcaccctgcgctccaccttcattgtcggctac
cccggcgagaccgaggccgagttccagacccttctggattggctcgacgaagcgcaactg
gatcgcatcggctgcttccagtacgaaaacgtcgatggcgcgcggtccaacgcgctgcca
gatcacgtgccagccgaggtcaaacaagaccgttgggaccgcttcatggagaaggcccaa
gcgatttccgaggccaagttgcaagccaaagtgggccgcaccatgcaagtgctggtggac
gccgtggacgaagaaggcgccacctgccggaccacggcagacgcgcccgaaatcgacggc
aacctgttcatcgacgaagggtttgagcacctgaagcccggcgacatggtcacggtcgag
gtagacgaagccagcgattacgacctttgggggacaccaaccgcctaa
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