Gymnodinialimonas sp. 57CJ19: AADW23_01635
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Entry
AADW23_01635 CDS
T10345
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gyj Gymnodinialimonas sp. 57CJ19
Pathway
gyj00521
Streptomycin biosynthesis
gyj00523
Polyketide sugar unit biosynthesis
gyj00525
Acarbose and validamycin biosynthesis
gyj00541
Biosynthesis of various nucleotide sugars
gyj01100
Metabolic pathways
gyj01110
Biosynthesis of secondary metabolites
gyj01250
Biosynthesis of nucleotide sugars
Module
gyj_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gyj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AADW23_01635 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AADW23_01635 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AADW23_01635 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AADW23_01635 (rfbB)
00525 Acarbose and validamycin biosynthesis
AADW23_01635 (rfbB)
Enzymes [BR:
gyj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AADW23_01635 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NmrA
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
WZN79008
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Position
complement(333523..334563)
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AA seq
346 aa
AA seq
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MKILITGGAGFIGSAVIRLAVARGHEVINLDALTYAACLENVASVASSNLYTFEHADICD
PAAMATILARHNPDAILHLAAESHVDRSIDGPAAFIQTNVTGTTTLLDAARAHWEARGKP
DSFLFHHVSTDEVYGTLGDTGLFTEDTPYAPNSPYSASKAASDHIVRAWHETYGLPVLLT
NCSNNYGPYHFPEKLIPVVILKALAGEPIPVYGDGMNIRDWLYVEDHADALLCVLENGEV
GRSYNIGGHNERTNIDLVRAICGLLDARRPQNAPHADLITFVADRPGHDLRYAIDASRIQ
DELGWTPSVTVEEGLEKTVDWFLANEPWWRALQERDGVGARLGTKA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttatcaccggcggcgcggggttcattggctctgccgtgatccgccttgcc
gtcgcccgtggccacgaagtgatcaaccttgatgcgctgacctatgccgcatgtctggag
aatgtggcgtccgttgcgtcttcaaacctctatacctttgagcacgccgatatttgtgac
cctgcggcgatggcaaccattctggcgcggcacaatcccgatgcgatcctgcaccttgct
gccgaaagccacgttgaccgctccattgatgggccggctgcattcatccaaaccaacgta
actggcaccaccaccctgcttgatgccgcccgggcccattgggaggcgcgtggcaagccc
gacagcttcctcttccaccacgtctctaccgatgaggtctacggcacccttggtgataca
ggcctgttcaccgaagacacgccctatgcgcccaatagcccctattcggcgtccaaggcg
gcgtccgatcatatcgtccgtgcgtggcatgaaacctacggccttccggttctgctgacc
aattgttccaacaattacggcccctatcacttcccggaaaagttgatccccgtggtgatc
ctcaaggctctcgcgggggagccgatcccggtctacggcgacggcatgaacattcgcgat
tggctgtacgtagaagaccacgccgatgcgctgctatgtgtgctggagaacggcgaggtc
ggccgcagctacaacatcggtggccataatgagcggacgaacatcgaccttgtgcgggcc
atttgcggcctgttggacgcgcgtcgaccgcagaacgccccccatgccgatctgatcacc
ttcgtcgcagaccgccccggtcacgatttgcgctacgcgattgatgccagccgcattcag
gatgaactgggctggaccccttccgtgaccgtcgaagagggccttgaaaagaccgtggat
tggttcttggccaatgagccgtggtggcgtgctttgcaggaacgcgacggtgttggggcg
cgtttggggacgaaagcgtga
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