Gymnodinialimonas sp. 57CJ19: AADW23_02455
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Entry
AADW23_02455 CDS
T10345
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gyj Gymnodinialimonas sp. 57CJ19
Pathway
gyj00061
Fatty acid biosynthesis
gyj00071
Fatty acid degradation
gyj01100
Metabolic pathways
gyj01212
Fatty acid metabolism
gyj02024
Quorum sensing
gyj04146
Peroxisome
Module
gyj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gyj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AADW23_02455
00071 Fatty acid degradation
AADW23_02455
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AADW23_02455
09145 Cellular community - prokaryotes
02024 Quorum sensing
AADW23_02455
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gyj01004
]
AADW23_02455
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gyj04147
]
AADW23_02455
Enzymes [BR:
gyj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AADW23_02455
Lipid biosynthesis proteins [BR:
gyj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AADW23_02455
Exosome [BR:
gyj04147
]
Exosomal proteins
Exosomal proteins of breast milk
AADW23_02455
Exosomal proteins of breast cancer cells
AADW23_02455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WZN79159
LinkDB
All DBs
Position
complement(492491..494464)
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AA seq
657 aa
AA seq
DB search
MADTKPSTGALQSVPALLRRNAAEFAGRAAYREKEYGIWQSWTWSETLEEIEALSLGLIG
LGLNRGDYVAVIGRNRPALYWSIVAVEMAGGVPVPLYQDAVAEEMTYVLEHCGARFVIGG
DQEQVDKVIEAQESLQGIEQIIYLDRRGMRKYDHTMMNALDDVQAEGRAARQRLLPELQA
REAELTYDSTCVMLYTSGTTGKPKGVVLSNRNIIETSKASCEFDNLRMEDEVLAYLPMAW
VGDFIFSIGQAYWSGFCVNCPESAETMMTDLREIGPTYFFAPPRVFETLLTSVMIRMEDA
GKLKKGMFDRAMARAKIIGPRILDGKHVTLGDRIVYAIDTALVIGPLKNTLGMSRVRVGY
TAGEAIGPEIFDFYRALGINLKQLYGQTEASVFITQQPDSEVRPDTVGVPSPGVELKIGE
NGEVFYRSPGTFVEYYKNPESTASTKDPEGWVATGDAGFIEEGSGHLRILDRAKDVGKMA
QGGLFAPKFVENKLKFYPDILEAVVFGAEKEFCTAFINIDLSAVGNWAERNNIAYASYQE
LAGHPQVLSSLKGHVEAVNKSVAEDPMLAHCQIARFLVLHKELDADDGEMTRTRKVRRRI
VEEKFADLLDALYGGKTEQYTETEVTYEDGRKGKITATLQIIDAATVNVGNPQMAAE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
ttggctgatacaaaaccgtcgacaggcgcgctgcaatccgtgcctgcgcttctgcgccgc
aatgcggctgaattcgcgggccgcgcggcgtaccgcgaaaaggaatacggaatctggcaa
agctggacctggagcgagacgctggaagagatcgaggcattgtccctcggtctgatcggc
cttggtctgaaccggggcgactatgtcgccgtcatcggccgcaaccgtcccgctttatat
tggtccatcgtggccgttgaaatggctggcggcgtgccggtgccattgtaccaagacgcc
gtcgcggaagaaatgacatacgtgctggagcactgcggtgcccgcttcgtcatcggcggc
gatcaggaacaagtcgataaggtgattgaggcgcaggaatccctgcaagggatcgagcag
atcatctacctggaccggcgcgggatgcgcaaatacgaccacaccatgatgaatgcgctg
gacgacgtgcaggccgaaggccgcgccgcgcgtcagcgtttgctgcctgaattgcaggcc
cgtgaggccgagctgacctacgacagcacctgtgtgatgctttatacctcgggcaccacg
ggcaagccgaagggcgttgtgctgtcgaatcgcaacattatcgagacctccaaggcgtcg
tgcgagttcgataacctgcggatggaagacgaggttctggcctatcttccaatggcttgg
gtgggggatttcatcttctccatcgggcaggcctattggtcgggcttctgcgtcaattgc
cccgaaagcgcggaaacgatgatgaccgacctgcgcgagatcgggcccacctatttcttc
gcgccgccgcgtgtgttcgagacgctgttgaccagcgtgatgatccgtatggaagacgcc
ggcaagctgaagaaaggcatgttcgatcgcgccatggcgcgggccaagatcatcgggcca
aggattctggacggcaagcacgtgacccttggggaccggattgtttacgccatcgacacg
gcgctggtgatcgggccgctcaagaacaccctgggcatgagccgggtccgcgtgggttac
acagcgggcgaagccattgggccggaaatctttgatttctatagagctttgggcatcaac
ctgaaacagctctacggccagaccgaagccagcgtgttcatcacacagcaacccgacagc
gaagtgcgccccgatacggttggcgtgccgtcgccgggggtggagctgaagatcggcgag
aatggagaggtgttctaccgctctccgggcaccttcgtggaatactacaagaaccccgaa
agcaccgcttcgaccaaagatcccgaaggctgggtcgcgaccggtgacgcgggctttatc
gaagaaggctcggggcatctgcgtatcctcgaccgggccaaggatgtgggcaaaatggcc
caaggcgggctgttcgcgccgaagttcgtggagaacaagctgaagttctaccctgacatt
ctggaagccgttgtttttggggcggaaaaagagttctgcactgccttcatcaacattgat
ctgagcgccgtcggcaattgggctgagcgcaacaatatcgcctatgcgtcttatcaggaa
ttggcggggcatccgcaggtcctgtcctcgctcaaggggcatgtggaagcggttaacaaa
tccgtcgccgaagacccgatgctggcccattgccagatcgcgcggttccttgtgttgcac
aaggaactggacgccgatgacggtgaaatgacccgtacgcgcaaggtgcgccgtcggatc
gtggaagagaagttcgctgaccttctggatgcgctttatggtggaaaaacagagcagtac
accgagacggaagtgacctacgaggatggccggaagggcaagatcacggccactttgcag
atcattgatgcagcgacggttaacgtgggcaacccccagatggcggcggaatga
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